About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1358236-1358482
(-)
cobalamin
1356052-1357996 (-)
Cag_1014
TonB-dependent receptor-related protein
Cag_1014
Single gene
DOOR ID:
1716166
Cag_1014
View Structure
2
1604667-1604787
(+)
SAM
1604934-1606008 (+)
Cag_1206
Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)
Cag_1206
Single gene
DOOR ID:
1716252
Cag_1206
View Structure
Genome:
Chlorobium chlorochromatii CaD3
(
NC_007514.1
);
Phylum:
Bacteroidetes/Chlorobi group
a:3:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_007514.1";i:2;s:32:"Chlorobium chlorochromatii CaD3 ";i:3;s:28:"Bacteroidetes/Chlorobi group";i:4;s:5:"68336";i:5;s:15:"1358236-1358482";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"1356052-1357996";i:10;s:1:"-";i:11;s:8:"Cag_1014";i:12;s:39:"TonB-dependent receptor-related protein";i:13;s:8:"Cag_1014";i:14;s:11:"Single gene";i:15;s:7:"1716166";i:16;s:8:"Cag_1014";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_007514.1";i:2;s:32:"Chlorobium chlorochromatii CaD3 ";i:3;s:28:"Bacteroidetes/Chlorobi group";i:4;s:5:"68336";i:5;s:15:"1604667-1604787";i:6;s:1:"+";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:15:"1604934-1606008";i:10;s:1:"+";i:11;s:8:"Cag_1206";i:12;s:74:"Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)";i:13;s:8:"Cag_1206";i:14;s:11:"Single gene";i:15;s:7:"1716252";i:16;s:8:"Cag_1206";i:17;s:44:"methionine biosynthetic process [GO:0009086]";i:18;s:15:"View Structure ";}}