Genome: Burkholderia sp. 383 chromosome I (NC_007510.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 173595-173728 (-)glycine172391-173510 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
Bcep18194_A3325Operon

DOOR ID: 149237
Bcep18194_A3323,
Bcep18194_A3324,
Bcep18194_A3325 (gcvT)
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2 173762-173865 (-)glycine172391-173510 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
Bcep18194_A3325Operon

DOOR ID: 149237
Bcep18194_A3323,
Bcep18194_A3324,
Bcep18194_A3325 (gcvT)
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3 233788-233904 (+)SAH233936-235355 (+)Bcep18194_A3375

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Bcep18194_A3375Single gene

DOOR ID: 1711552
Bcep18194_A3375 View Structure
4 377403-377526 (+)TPP377751-378888 (+)Bcep18194_A3508

Glycine oxidase (9)
Bcep18194_A3508Operon

DOOR ID: 149272
Bcep18194_A3508,
Bcep18194_A3509,
Bcep18194_A3510 (thiG),
Bcep18194_A3511
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5 810912-811012 (+)ZMP-ZTP811149-812397 (+)glyA

Serine hydroxymethyltransferase 3 (SHMT 3) (Serine methylase 3)
Bcep18194_A3895Operon

DOOR ID: 149354
Bcep18194_A3895 (glyA),
Bcep18194_A3896 (nrdR)
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6 1059690-1059827 (-)yybP-ykoY1058285-1058984 (+)Bcep18194_A4127

Bcep18194_A4127Single gene

DOOR ID: 1711797
Bcep18194_A4127 View Structure
7 1285154-1285270 (-)TPP1283097-1285029 (-)Bcep18194_A4331

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Bcep18194_A4331Single gene

DOOR ID: 1711870
Bcep18194_A4331 View Structure
8 1816304-1816541 (-)cobalamin1815384-1816134 (-)Bcep18194_A4802

Uroporphyrinogen-III C-methyltransferase (07)
Bcep18194_A4802Operon

DOOR ID: 149542
Bcep18194_A4799,
Bcep18194_A4800,
Bcep18194_A4801,
Bcep18194_A4802
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9 1818666-1818932 (+)cobalamin1819261-1820350 (+)Bcep18194_A4805

Cobalamin synthesis protein/P47K
Bcep18194_A4805Operon

DOOR ID: 149544
Bcep18194_A4805,
Bcep18194_A4806 (cobN),
Bcep18194_A4807,
Bcep18194_A4808,
Bcep18194_A4809
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10 1841871-1842062 (-)cobalamin1840399-1841836 (-)Bcep18194_A4824

Nitrite/sulfite reductase; hemoprotein beta subunit
Bcep18194_A4824Operon

DOOR ID: 149547
Bcep18194_A4821,
Bcep18194_A4822,
Bcep18194_A4823 (cobH),
Bcep18194_A4824
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11 2902037-2902288 (-)cobalamin2900879-2901878 (-)Bcep18194_A5786

ABC cobalamin/Fe3+-siderophore transporter; inner membrane subunit
Bcep18194_A5786Operon

DOOR ID: 149745
Bcep18194_A5782,
Bcep18194_A5783 (cobS),
Bcep18194_A5784 (cobT),
Bcep18194_A5785,
Bcep18194_A5786
View Structure
12 3151572-3151720 (-)FMN3150742-3151453 (-)Bcep18194_A6016

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Bcep18194_A6016Single gene

DOOR ID: 1712550
Bcep18194_A6016 View Structure
13 4357234-4357280 (-)mini-ykkC4356368-4356902 (+)blc

SBO_4307Operon

DOOR ID: 158844
SBO_4302 (frdA),
SBO_4303 (frdB),
SBO_4304 (frdC),
SBO_4305 (frdD),
SBO_4306 (ampC),
SBO_4307 (blc)
View Structure