RiboswitchDB

Genome: Rhodobacter sphaeroides 2.4.1 chromosome II (NC_007494.2); Phylum: Alphaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

239508-239721 (-)

cobalamin

238769-239447 (-)

RSP_3186

Single gene

DOOR ID: 1706718

RSP_3186

2

274276-274455 (+)

cobalamin

274499-275192 (+)

RSP_3218

5;6-dimethylbenzimidazole synthase cob(II)yrinic acid a;c-diamide reductase

Single gene

DOOR ID: 1706726

RSP_3218

3

458014-458214 (-)

cobalamin

456837-457842 (-)

RSP_3392

ABC Fe3+-siderophores transporter; periplasmic binding protein

Operon

DOOR ID: 146733

RSP_3390,
RSP_3391,
RSP_3392

4

688579-688628 (-)

SAM-SAH

687405-688572 (-)

metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)

Operon

DOOR ID: 146773

RSP_3595 (metK),
RSP_3596 (lnt)

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";}}