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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
243747-243850
(-)
ykkC-yxkD
242827-243700 (-)
RSP_1649
Putative transporter; DMT superfamily
RSP_1649
Single gene
DOOR ID:
1705700
RSP_1649
View Structure
2
444939-445015
(+)
sam-alpha
445063-446245 (+)
metZ
O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
RSP_1851
Single gene
DOOR ID:
1705768
RSP_1851
(metZ)
View Structure
3
804587-804678
(+)
glycine
804816-805950 (+)
gcvT
Putative aminomethyltransferase; tetrahydrofolate dependent (0)
RSP_2193
Operon
DOOR ID:
146182
RSP_2193
(gcvT)
,
RSP_2194
(gcvH)
,
RSP_2195
(gcvP)
View Structure
4
1030432-1030632
(+)
cobalamin
1030758-1032594 (+)
RSP_2402
Putative TonB dependent Vitamin B12 outer membrane receptor
RSP_2402
Operon
DOOR ID:
146227
RSP_2402,
RSP_2403,
RSP_2404,
RSP_2405,
RSP_2406
View Structure
5
1481651-1481845
(+)
cobalamin
1481943-1482303 (+)
RSP_2829
Putative metal-binding protein
RSP_2829
Operon
DOOR ID:
146309
RSP_2829,
RSP_2828
(cobW)
,
RSP_2827
(cobN)
,
RSP_6217
(cobH)
,
RSP_2826
(cobI)
,
RSP_2824
(cobJ)
View Structure
6
2388506-2388603
(-)
TPP
2387669-2388458 (-)
thiM
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
RSP_0649
Operon
DOOR ID:
146492
RSP_0644,
RSP_0645,
RSP_0646,
RSP_0647
(thiD)
,
RSP_0648
(thiE)
,
RSP_0649
(thiM)
View Structure
7
2531207-2531414
(+)
cobalamin
2531500-2531917 (+)
RSP_0787
RSP_0787
Operon
DOOR ID:
146519
RSP_0787,
RSP_0788,
RSP_0789
(cobC)
View Structure
8
3168810-3168909
(+)
TPP
3169902-3171417 (+)
thiP
Thiamin ABC transporter membrane component
RSP_1392
Operon
DOOR ID:
146648
RSP_1391
(tbpA)
,
RSP_1392
(thiP)
,
RSP_1393
(thiQ)
View Structure
Genome:
Rhodobacter sphaeroides 2.4.1 chromosome I
(
NC_007493.2
);
Phylum:
Alphaproteobacteria
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