Genome: Pseudoalteromonas haloplanktis TAC125 chromosome I (NC_007481.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 189244-189441 (-)lysine188206-189091 (-)dapA

4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase)

DOOR ID: 143401
PSHAa0178 (dcdA),
PSHAa0179 (dapD),
PSHAa0180 (dapA)
View Structure
2 497084-497196 (+)TPP497368-499321 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 143462
PSHAa0480 (thiC),
PSHAa0481 (thiO),
PSHAa0482 (thiS),
PSHAa0483 (thiG),
PSHAa0484 (thiDE),
PSHAa0485 (thiF)
View Structure
3 1283774-1283954 (+)FMN1284112-1284766 (+)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
PSHAa1233Single gene

DOOR ID: 1701595
PSHAa1233 (ribB) View Structure
4 1303969-1304141 (+)lysine1305584-1306328 (-)PSHAa1251

Putative orphan protein
PSHAa1251Single gene

DOOR ID: 1701606
PSHAa1251 View Structure
5 2422175-2422340 (-)cobalamin2420287-2422138 (-)PSHAa2275

Putative TonB-dependent Outer membrane receptor
PSHAa2275Single gene

DOOR ID: 1702051
PSHAa2275 View Structure
6 2713267-2713408 (-)cobalamin2712375-2713188 (-)fhuC

Putative Iron-compound ABC transporter; ATP-binding protein (5)

DOOR ID: 143827
PSHAa2561 (ung),
PSHAa2563 (btuR),
PSHAa2564 (cobQ),
PSHAa2566 (fhuC)
View Structure