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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
615164-615208
(-)
PreQ1
614036-615020 (-)
SAK_0679
SAK_0679
Operon
DOOR ID:
141806
SAK_0678,
SAK_0679
View Structure
2
817263-817377
(+)
FMN
817570-818680 (+)
ribD
SAK_0872
Operon
DOOR ID:
141846
SAK_0872
(ribD)
,
SAK_0873
(ribE)
,
SAK_0874
(ribBA)
,
SAK_0875
(ribH)
View Structure
3
892419-892517
(-)
TPP
891797-892361 (-)
SAK_0940
SAK_0940
Single gene
DOOR ID:
1697759
SAK_0940
View Structure
4
913402-913491
(+)
TPP
913646-914213 (+)
SAK_0958
SAK_0958
Operon
DOOR ID:
141862
SAK_0958,
SAK_0959,
SAK_0960,
SAK_0961
View Structure
5
925396-925509
(+)
preQ1-II
926155-928114 (+)
ligA
DNA ligase (Polydeoxyribonucleotide synthase [NAD(+)])
SAK_0973
Operon
DOOR ID:
141865
SAK_0973
(ligA)
,
SAK_0974,
SAK_0975
(pulA)
View Structure
6
1149089-1149184
(-)
purine
1148403-1148985 (-)
xpt
Xanthine phosphoribosyltransferase (XPRTase) (2)
SAK_1171
Operon
DOOR ID:
141911
SAK_1170
(pbuX)
,
SAK_1171
(xpt)
View Structure
7
1203251-1203383
(+)
glycine
1203539-1204886 (+)
SAK_1231
SAK_1231
Operon
DOOR ID:
141921
SAK_1231,
SAK_1232
View Structure
8
1418412-1418557
(-)
FMN
1417757-1418342 (-)
SAK_1436
SAK_1436
Operon
DOOR ID:
141972
SAK_1435,
SAK_1436
View Structure
Genome:
Streptococcus agalactiae A909
(
NC_007432.1
);
Phylum:
Firmicutes
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