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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
137269-137461
(+)
cobalamin
137574-138606 (+)
cbdbA145
cbdb_A145
Operon
DOOR ID:
138363
cbdb_A145
View Structure
2
520808-520935
(+)
cobalamin
521244-522258 (+)
fecB
cbdb_A633
Operon
DOOR ID:
138449
cbdb_A633
(fecB)
,
cbdb_A635
(fecD)
,
cbdb_A636
(fepC)
,
cbdb_A637
(rdhF)
,
cbdb_A638
(cbiB)
,
cbdb_A639
(cobD)
View Structure
3
527045-527238
(+)
cobalamin
527395-528454 (+)
cobT
cbdb_A641
Operon
DOOR ID:
138450
cbdb_A641
(cobT)
,
cbdb_A642
(cobS)
,
cbdb_A643
(cobC)
View Structure
4
613091-613186
(-)
TPP
611743-613039 (-)
thiC
cbdb_A749
Operon
DOOR ID:
138469
cbdb_A747,
cbdb_A748,
cbdb_A749
(thiC)
View Structure
5
888660-888799
(+)
cobalamin
888910-889675 (+)
rdhF
cbdb_A1097
Operon
DOOR ID:
138533
cbdb_B25,
cbdb_A1097
(rdhF)
View Structure
6
1188166-1188284
(-)
cobalamin
1187285-1188050 (-)
rdhF
cbdb_A1499
Single gene
DOOR ID:
1686482
cbdb_A1499
(rdhF)
View Structure
7
1260708-1260792
(+)
c-di-GMP-II
1260901-1262863 (+)
cbdbA1572
cbdb_A1572
Single gene
DOOR ID:
1686503
cbdb_A1572
View Structure
Genome:
Dehalococcoides sp. CBDB1
(
NC_007356.1
);
Phylum:
Chloroflexi
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