RiboswitchDB

Genome: Ralstonia eutropha JMP134 chromosome I (NC_007348.1); Phylum: Betaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

18312-18427 (-)

ykkC-yxkD

17319-18258 (-)

Reut_B3481

Single gene

DOOR ID: 1681212

Reut_B3481

2

317583-317682 (+)

glycine

317824-319075 (+)

Reut_B3726

D-amino acid dehydrogenase small subunit

Single gene

DOOR ID: 1681300

Reut_B3726

3

670465-670628 (+)

FMN

670801-671473 (+)

ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)

Single gene

DOOR ID: 1681408

Reut_B4029 (ribB)

4

1472155-1472201 (+)

mini-ykkC

1472224-1472545 (+)

sugE

BURPS1710b_1399

Single gene

DOOR ID: 1699666

BURPS1710b_1399 (sugE)

5

1610941-1611056 (-)

ykkC-yxkD

1609862-1610882 (-)

Reut_B4888

ABC transporter; substrate-binding protein; aliphatic sulfonates

Operon

DOOR ID: 137031

Reut_B4884,
Reut_B4885,
Reut_B4886,
Reut_B4887,
Reut_B4888

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";}}