Genome: Dechloromonas aromatica RCB (NC_007298.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 57435-57505 (-)SAH53691-57354 (-)metH

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)		Daro_0046Single gene

DOOR ID: 1675747		Daro_0046 (metH) View Structure
2 86805-86928 (+)ykkC-yxkD87026-87800 (+)Daro_0072

Daro_0072Operon

DOOR ID: 133839		Daro_0072,
Daro_0073,
Daro_0074,
Daro_0075		 View Structure
3 88477-88521 (+)mini-ykkC88540-92146 (+)Daro_0074

Daro_0074Operon

DOOR ID: 133839		Daro_0072,
Daro_0073,
Daro_0074,
Daro_0075		 View Structure
4 155587-155783 (-)cobalamin153888-154803 (-)cobD

Cobalamin biosynthesis protein CobD		Daro_0140Operon

DOOR ID: 133855		Daro_0137,
Daro_0138,
Daro_0139,
Daro_0140 (cobD),
Daro_0141		 View Structure
5 161909-162139 (+)cobalamin162209-163256 (+)cobT

Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)		Daro_0148Operon

DOOR ID: 133858		Daro_0148 (cobT),
Daro_0149 (cobS)		 View Structure
6 204972-205033 (-)SAH203477-204890 (-)Daro_0186

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		Daro_0186Operon

DOOR ID: 133865		Daro_0183,
Daro_0184,
Daro_0185,
Daro_0186		 View Structure
7 457899-458100 (+)cobalamin458184-458352 (+)Daro_0416

Daro_0416Operon

DOOR ID: 133915		Daro_0416,
Daro_0417		 View Structure
8 1814218-1814489 (-)cobalamin1811931-1814085 (-)Daro_1684

TonB-dependent receptor		Daro_1684Single gene

DOOR ID: 1676183		Daro_1684 View Structure
9 1825158-1825366 (-)cobalamin1824334-1825012 (-)Daro_1697

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)		Daro_1697Operon

DOOR ID: 134175		Daro_1685,
Daro_1686,
Daro_1687,
Daro_1688,
Daro_1689,
Daro_1690 (cbiD),
Daro_1691,
Daro_1692,
Daro_1693,
Daro_1694,
Daro_1695,
Daro_1696,
Daro_1697		 View Structure
10 2431470-2431642 (+)yybP-ykoY2432241-2433294 (+)Daro_2249

Daro_2249Operon

DOOR ID: 134294		Daro_2248,
Daro_2249		 View Structure
11 2662640-2662728 (+)glycine2662896-2663988 (+)Daro_2463

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Daro_2463Operon

DOOR ID: 134332		Daro_2463,
Daro_2464		 View Structure
12 2662740-2662819 (+)glycine2662896-2663988 (+)Daro_2463

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Daro_2463Operon

DOOR ID: 134332		Daro_2463,
Daro_2464		 View Structure
13 3464439-3464533 (-)glycine3463611-3464280 (-)Daro_3213

Daro_3213Single gene

DOOR ID: 1676629		Daro_3213 View Structure
14 4217781-4217877 (-)TPP4215810-4217727 (-)Daro_3921

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Daro_3921Single gene

DOOR ID: 1676812		Daro_3921 View Structure
15 4325963-4326169 (+)cobalamin4326272-4328432 (+)Daro_4029

TonB-dependent receptor		Daro_4029Single gene

DOOR ID: 1676835		Daro_4029 View Structure
16 4328475-4328682 (+)cobalamin4330778-4331756 (+)Daro_4031

Transport system permease protein		Daro_4031Operon

DOOR ID: 134679		Daro_4030,
Daro_4031,
Daro_4032,
Daro_4033,
Daro_4034		 View Structure