Genome: Vibrio fischeri ES114 chromosome I (NC_006840.2); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 35443-35510 (+)fluoride35636-37016 (+)VF_0031

Chloride channel protein
VF_0031Single gene

DOOR ID: 1657347
VF_0031 View Structure
2 37315-37427 (+)TPP37616-39551 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 125069
VF_0032 (thiC),
VF_0033 (thiE),
VF_0034 (thiF),
VF_2576 (thiS),
VF_0035 (thiG),
VF_0036 (thiH)
View Structure
3 270205-270317 (+)TPP270370-271387 (+)tbpA

Thiamine/thiamine pyrophosphate ABC transporter; thiamine/thiamine pyrophospate-binding protein ThiB/TbpA/SfuA

DOOR ID: 125103
VF_0267 (tbpA),
VF_0268 (thiP),
VF_0269 (thiQ)
View Structure
4 1607848-1607953 (+)glycine1608050-1609433 (+)VF_1454

Sodium-linked D-alanine glycine permease
VF_1454Single gene

DOOR ID: 1657907
VF_1454 View Structure
5 2736076-2736294 (-)cobalamin2734182-2736030 (-)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 125494
VF_2435 (btuB)
View Structure