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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
718866-718950
(+)
c-di-GMP-I
719049-720846 (+)
ebA1220
Serine proteases; subtilase family
ebA1220
single gene
DOOR ID:
1645973
ebA1220
View Structure
2
995591-995768
(+)
yybP-ykoY
995774-996353 (+)
ebA1709
ebA1709
Single gene
DOOR ID:
1646049
ebA1709
View Structure
3
996439-996540
(+)
TPP
996585-997431 (+)
thiD
Putative phosphomethylpyrimidine kinase
ebA1711
Operon
DOOR ID:
119325
ebA1711
(thiD)
,
ebA1712
(thiC)
,
ebD37
View Structure
4
1088383-1088448
(+)
SAH
1088522-1089935 (+)
ahcY
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
ebA1874
Operon
DOOR ID:
119349
ebA1873,
ebA1874
(ahcY)
,
ebA1875
(metF)
,
ebA1878
(cueO)
View Structure
5
1900922-1901003
(+)
SAH
1901091-1904856 (+)
metH
Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)
ebA3184
Single gene
DOOR ID:
1646307
ebA3184
(metH)
View Structure
6
2366730-2366982
(+)
cobalamin
2367109-2369050 (+)
ebA4013
Putative TONB-dependent receptor
ebA4013
Single gene
DOOR ID:
1646474
ebA4013
View Structure
7
2373817-2374002
(+)
cobalamin
2374047-2374800 (+)
ebA4029
Nitroreductase family protein
ebA4029
Operon
DOOR ID:
119610
ebA4025
(cysG)
,
ebA4027
(cobB)
,
ebA4026,
ebA4029
View Structure
8
3059806-3059946
(-)
cobalamin
3058933-3059731 (-)
tonB
Predicted gram-negative bacterial tonB protein
ebA5156
Single gene
DOOR ID:
1646664
ebA5156
(tonB)
View Structure
9
3631159-3631246
(-)
glycine
3629877-3630960 (-)
gcvT
Aminomethyltransferase (0) (Glycine cleavage system T protein)
ebA6126
Single gene
DOOR ID:
1646830
ebA6126
(gcvT)
View Structure
Genome:
Aromatoleum aromaticum EbN1
(
NC_006513.1
);
Phylum:
Betaproteobacteria
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