Genome: Bacillus licheniformis DSM 13 = ATCC 14580 (NC_006322.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 183152-183325 (+)glmS183420-185223 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		BLi00204Single gene

DOOR ID: 1622675		BLi00204 (glmS) View Structure
2 378413-378499 (+)c-di-GMP-I378682-389425 (+)lchAA

BLi00401operon

DOOR ID: 108209		BLi00401 (lchAA),
BLi00402 (lchAB),
BLi00403 (lchAC),
BLi00404 (lchAD)		 View Structure
3 525158-525301 (+)ydaO-yuaA525397-527221 (+)ydaO

BLi00519Single gene

DOOR ID: 1622794		BLi00519 (ydaO) View Structure
4 542305-542446 (+)ydaO-yuaA542520-543765 (+)BLi00536

BLi00536Operon

DOOR ID: 108239		BLi00536,
BLi00537 (ydbJ),
BLi00538 (ydbK)		 View Structure
5 692981-693082 (+)purine693214-694537 (+)pbuG

BLi00688Single gene

DOOR ID: 1622876		BLi00688 (pbuG) View Structure
6 696838-696940 (+)purine697076-697565 (+)purE

BLi00693Operon

DOOR ID: 108261		BLi00693 (purE),
BLi00694 (purK),
BLi00695 (purB),
BLi00696 (purC),
BLi00697 (purS),
BLi00698 (purQ),
BLi00699 (purL),
BLi00700 (purF),
BLi00701 (purM),
BLi00702 (purN),
BLi00703 (purH),
BLi00704 (purD)		 View Structure
7 712273-712359 (+)yybP-ykoY712587-713034 (+)yybP

BLi00708Single gene

DOOR ID: 1622881		BLi00708 (yybP) View Structure
8 942035-942143 (+)TPP942290-944066 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		BLi00940Single gene

DOOR ID: 1622984		BLi00940 (thiC) View Structure
9 969726-969839 (+)SAM969939-970941 (+)BLi00972

Methionine import ATP-binding protein MetN 1 		BLi00972Operon

DOOR ID: 108308		BLi00972,
BLi00973,
BLi00974		 View Structure
10 1207622-1207733 (-)SAM1205711-1207541 (-)yitJ

BLi01193Operon

DOOR ID: 108350		BLi01192 (metH),
BLi01193 (yitJ)		 View Structure
11 1271200-1271308 (+)TPP1271391-1272093 (+)tenA

BLi01259Operon

DOOR ID: 108364		BLi01259 (tenA),
BLi01260 (tenI),
BLi01261 (thiO),
BLi01262 (thiS),
BLi01263 (thiG),
BLi01264 (thiF),
BLi01265 (thiD)		 View Structure
12 1292148-1292264 (+)SAM1292289-1293453 (+)metI

BLi01289Operon

DOOR ID: 108368		BLi01289 (metI),
BLi01290 (metC)		 View Structure
13 1406463-1406565 (+)ykkC-yxkD1406625-1406955 (+)ykkC

Probable guanidinium efflux system subunit GdnC		BLi01409Operon

DOOR ID: 108395		BLi01409 (ykkC),
BLi01410 (ykkD)		 View Structure
14 1418301-1418488 (-)cobalamin1415862-1418151 (-)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		BLi01422Single gene

DOOR ID: 1623167		BLi01422 (metE) View Structure
15 1420164-1420328 (+)ykoK1420575-1421931 (+)mgtE

BLi01426Operon

DOOR ID: 108398		BLi01426 (mgtE),
BLi01427		 View Structure
16 1471422-1471594 (+)yybP-ykoY1471644-1472412 (+)ykoY

BLi01498Single gene

DOOR ID: 1623187		BLi01498 (ykoY) View Structure
17 1487363-1487506 (-)SAM1486081-1487278 (-)mtnK

Methylthioribose kinase (MTR kinase) (00)		BLi01512Operon

DOOR ID: 108419		BLi01511 (mtnA),
BLi01512 (mtnK)		 View Structure
18 1489705-1489804 (+)SAM1489861-1491106 (+)mtnW

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		BLi01515Operon

DOOR ID: 108420		BLi01515 (mtnW),
BLi01516 (mtnB/mtnX),
BLi01517 (mtnD)		 View Structure
19 1501710-1501754 (+)PreQ11501892-1502552 (+)queC

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		BLi01527Operon

DOOR ID: 108423		BLi01527 (queC),
BLi01528 (queD),
BLi01529 (queE),
BLi01530 (queF1)		 View Structure
20 1735574-1735680 (+)SAM1735756-1735900 (+)BLi01777

BLi01777Single gene

DOOR ID: 1623297		BLi01777 View Structure
21 2295689-2295788 (-)purine2294985-2295570 (-)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)		BLi02348Operon

DOOR ID: 108585		BLi02347 (pbuX),
BLi02348 (xpt)		 View Structure
22 2382069-2382202 (-)FMN2381334-2381913 (-)ribU

BLi02444Single gene

DOOR ID: 1623561		BLi02444 (ribU) View Structure
23 2409118-2409268 (-)FMN2407920-2409009 (-)ribD

BLi02475Operon

DOOR ID: 108613		BLi02472 (ribH),
BLi02473 (ribA),
BLi02474 (ribE),
BLi02475 (ribD)		 View Structure
24 2547318-2547422 (-)glycine2545978-2547073 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		BLi02631Operon

DOOR ID: 108646		BLi02629 (gcvPB),
BLi02630 (gcvPA),
BLi02631 (gcvT)		 View Structure
25 2878051-2878230 (-)lysine2876671-2877901 (-)lysC

BLi02996Single gene

DOOR ID: 1623744		BLi02996 (lysC) View Structure
26 3063609-3063716 (-)SAM3062727-3063552 (-)BLi03178

BLi03178Single gene

DOOR ID: 1623824		BLi03178 View Structure
27 3080616-3080753 (-)SAM3079080-3080283 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		BLi03196Single gene

DOOR ID: 1623830		BLi03196 (metK) View Structure
28 3125049-3125148 (+)TPP3125259-3125844 (+)thiT

BLi03258Single gene

DOOR ID: 1623849		BLi03258 (thiT) View Structure
29 3302509-3302616 (-)SAM3301366-3302392 (-)metN

Methionine import ATP-binding protein MetN 2 		BLi03457Operon

DOOR ID: 108806		BLi03455 (metQ),
BLi03456 (metP),
BLi03457 (metN)		 View Structure
30 3365767-3365943 (-)lysine3364248-3365652 (-)yvsH

BLi03522Single gene

DOOR ID: 1623964		BLi03522 (yvsH) View Structure
31 3988810-3988916 (-)ykkC-yxkD3987887-3988724 (-)yxkD

BLi04161Single gene

DOOR ID: 1624206		BLi04161 (yxkD) View Structure
32 4014357-4014466 (+)SAM4014539-4015670 (+)yxjG

BLi04187Single gene

DOOR ID: 1624213		BLi04187 (yxjG) View Structure
33 4024324-4024425 (+)purine4024559-4025753 (+)nupG

BLi04195Single gene

DOOR ID: 1624214		BLi04195 (nupG) View Structure
34 4036930-4037034 (-)TPP4036131-4036818 (-)BLi04205

BLi04205Operon

DOOR ID: 108950		BLi04202 (thiX),
BLi04203 (thiW),
BLi04204 (thiV),
BLi04205		 View Structure