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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
145278-145429
(+)
FMN
145526-146171 (+)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
MS0172
Single gene
DOOR ID:
1621929
MS0172
(ribB)
View Structure
2
331815-331934
(-)
glycine
330319-331711 (-)
alsT
AlsT protein
MS0353
Single gene
DOOR ID:
1621986
MS0353
(alsT)
View Structure
3
631518-631611
(-)
TPP
631363-631510 (+)
MS0678
MS0678
Single gene
DOOR ID:
1622063
MS0678
View Structure
4
1003377-1003526
(+)
MOCO
1004603-1005080 (+)
moaC
Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)
MS1022
Operon
DOOR ID:
107839
MS1021
(moaA)
,
MS1022
(moaC)
,
MS1023
(moaD)
,
MS1024
(moaE)
View Structure
5
1325239-1325416
(-)
lysine
1323611-1325150 (-)
nhaC
NhaC protein
MS1321
Single gene
DOOR ID:
1622306
MS1321
(nhaC)
View Structure
6
1375924-1376014
(+)
TPP
1376030-1376171 (+)
MS1369
MS1369
Operon
DOOR ID:
107915
MS1369,
MS1370
(tbpA)
View Structure
7
1517700-1517793
(-)
TPP
1516638-1517658 (-)
tbpA
TbpA protein
MS1526
Operon
DOOR ID:
107948
MS1522,
MS1523
(bioB)
,
MS1524
(malK)
,
MS1525
(thiP)
,
MS1526
(tbpA)
View Structure
8
1848390-1848434
(+)
PreQ1
1849118-1849547 (+)
MS1856
6-carboxy-5;6;7;8-tetrahydropterin synthase
MS1856
Operon
DOOR ID:
108017
MS1855,
MS1856,
MS1857
(nrdG)
View Structure
Genome:
Mannheimia succiniciproducens MBEL55E
(
NC_006300.1
);
Phylum:
Gammaproteobacteria
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