Genome: Yersinia pseudotuberculosis IP 32953 (NC_006155.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 147318-147580 (+)cobalamin147648-149541 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 104271
YPTB0125 (btuB),
YPTB0126 (murI)
View Structure
2 350611-350736 (-)TPP348432-350478 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 104307
YPTB0285 (thiH),
YPTB0286 (thiG),
YPTB0287 (thiS),
YPTB0288 (thiF),
YPTB0289 (thiE),
YPTB0290 (thiC)
View Structure
3 487922-487968 (+)mini-ykkC487987-488302 (+)sugE

YPTB0409Single gene

DOOR ID: 1614721
YPTB0409 (sugE) View Structure
4 793561-793698 (-)TPP792493-793486 (-)tbpA

ABC transporter; periplasmic thiamine binding protein tbpA

DOOR ID: 104377
YPTB0661 (thiQ),
YPTB0662 (thiP),
YPTB0663 (tbpA)
View Structure
5 1307099-1307162 (-)fluoride1306614-1306998 (-)ccrB

Putative fluoride ion transporter CrcB 1
YPTB1089Single gene

DOOR ID: 1615015
YPTB1089 (ccrB) View Structure
6 1419284-1419430 (+)MOCO1420619-1421099 (+)moaC

Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)

DOOR ID: 104482
YPTB1191 (moaC),
YPTB1192 (moaD),
YPTB1193 (moaE)
View Structure
7 1981844-1982043 (-)yybP-ykoY1981263-1981833 (-)yebN

Putative manganese efflux pump MntP
YPTB1630Single gene

DOOR ID: 1615268
YPTB1630 (yebN) View Structure
8 3340615-3340719 (-)TPP3339690-3340491 (-)thiD

Putative phosphomethylpyrimidine kinase
YPTB2824Single gene

DOOR ID: 1615786
YPTB2824 (thiD) View Structure
9 4043205-4043394 (-)FMN4042308-4042962 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
YPTB3404Single gene

DOOR ID: 1616016
YPTB3404 (ribB) View Structure