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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
229918-230113
(-)
cobalamin
228790-229801 (-)
DP0212
Probable cobalt chelatase; chain A
DP0212
Single gene
DOOR ID:
1612874
DP0212
View Structure
2
530514-530608
(+)
TPP
531531-532302 (+)
DP0500
Probable ABC transporter; ATP-binding protein
DP0500
Operon
DOOR ID:
103503
DP0499,
DP0500,
DP0501,
DP0502
View Structure
3
773582-773727
(+)
FMN
773811-774456 (+)
DP0701
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
DP0701
Single gene
DOOR ID:
1613040
DP0701
View Structure
4
1448699-1448793
(+)
glycine
1448926-1450333 (+)
DP1296
Probable sodium/alanine symporter
DP1296
Single gene
DOOR ID:
1613275
DP1296
View Structure
5
2597609-2597706
(-)
TPP
2596268-2597516 (-)
DP2260
Related to Mn2+ and Fe2+ transporters of the NRAMP family
DP2260
Operon
DOOR ID:
103851
DP2259,
DP2260
View Structure
6
3382836-3382961
(-)
MOCO
3380631-3381867 (-)
DP2990
Probable molybdopterin biosynthesis protein (MoeA)
DP2990
Operon
DOOR ID:
103997
DP2990,
DP2991
View Structure
7
3500014-3500144
(+)
SAH
3500984-3501743 (-)
DP3099
Hypothetical membrane protein
DP3099
Single gene
DOOR ID:
1614030
DP3099
View Structure
Genome:
Desulfotalea psychrophila LSv54
(
NC_006138.1
);
Phylum:
delta/epsilon subdivisions
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