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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
277879-278008
(-)
TPP
275898-277794 (-)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
ACIAD0276
Operon
DOOR ID:
101330
ACIAD0274
(icc)
,
ACIAD0275
(aspP)
,
ACIAD0276
(thiC)
View Structure
2
406046-406112
(+)
fluoride
406177-406558 (+)
crcB
Putative fluoride ion transporter CrcB
ACIAD0404
Single gene
DOOR ID:
1609033
ACIAD0404
(crcB)
View Structure
3
624347-624557
(-)
cobalamin
622431-624327 (-)
btuB
Putative TonB-dependent Outer membrane receptor for vitamin B12/cobalamin transport (Btub)
ACIAD0634
Single gene
DOOR ID:
1609117
ACIAD0634
(btuB)
View Structure
4
1073618-1073719
(+)
ykkC-yxkD
1073778-1074105 (+)
ACIAD1076
ACIAD1076
Operon
DOOR ID:
101465
ACIAD1076,
ACIAD1077
View Structure
5
1990077-1990167
(-)
glycine
1988685-1989930 (-)
dadA
D-amino acid dehydrogenase; small subunit
ACIAD1998
Single gene
DOOR ID:
1608903
ACIAD1998
(dadA)
View Structure
6
2252901-2253015
(+)
SAH
2253028-2254432 (+)
sahH
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
ACIAD2282
Operon
DOOR ID:
101676
ACIAD2282
(sahH)
,
ACIAD2283
(metF)
,
ACIAD2284
View Structure
7
2847073-2847219
(+)
FMN
2847312-2847972 (+)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
ACIAD2913
Single gene
DOOR ID:
1609958
ACIAD2913
(ribB)
View Structure
8
3431383-3431498
(-)
yybP-ykoY
3430721-3431297 (-)
ACIAD3505
Putative membrane protein
ACIAD3505
Single gene
DOOR ID:
1610187
ACIAD3505
View Structure
Genome:
Acinetobacter sp. ADP1
(
NC_005966.1
);
Phylum:
Gammaproteobacteria
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