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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
157528-157683
(+)
glmS
157874-159677 (+)
BAS0160
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
BAS0160
Operon
DOOR ID:
98685
BAS0159,
BAS0160
View Structure
2
177161-177275
(-)
SAM
176262-177075 (-)
BAS0177
BAS0177
Operon
DOOR ID:
98689
BAS0175,
BAS0176,
BAS0177
View Structure
3
185585-185690
(+)
SAM
185820-186744 (+)
BAS0186
BAS0186
Operon
DOOR ID:
98691
BAS0186,
BAS0187,
BAS0188,
BAS0189,
BAS0190
View Structure
4
197082-197188
(-)
SAM
195308-196949 (-)
BAS0196
BAS0196
Single gene
DOOR ID:
1603842
BAS0196
View Structure
5
260654-260755
(+)
purine
260911-262459 (+)
guaA
GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)
BAS0254
Single gene
DOOR ID:
1603872
BAS0254
(guaA)
View Structure
6
262614-262715
(+)
purine
262843-264169 (+)
BAS0255
BAS0255
Single gene
DOOR ID:
1603873
BAS0255
View Structure
7
295344-295445
(+)
purine
295554-296040 (+)
BAS0275
BAS0275
Operon
DOOR ID:
98707
BAS0275,
BAS0276,
BAS0277,
BAS0278,
BAS0279,
BAS0280,
BAS0281,
BAS0282,
BAS0283,
BAS0284
(purN)
,
BAS0285
(purH)
,
BAS0286
View Structure
8
320618-320724
(+)
SAM
320847-321867 (+)
BAS0297
Methionine import ATP-binding protein MetN 2
BAS0297
Operon
DOOR ID:
98710
BAS0297,
BAS0298,
BAS0299
View Structure
9
342268-342369
(-)
purine
340868-342065 (-)
BAS0317
BAS0317
Single gene
DOOR ID:
1603889
BAS0317
View Structure
10
371030-371142
(-)
SAM
370310-370943 (-)
BAS0346
BAS0346
Single gene
DOOR ID:
1603906
BAS0346
View Structure
11
393927-394036
(+)
TPP
394108-394915 (+)
BAS0362
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
BAS0362
Operon
DOOR ID:
98721
BAS0362,
BAS0363
(thiE)
View Structure
12
397305-397389
(+)
c-di-GMP-I
397530-399270 (+)
BAS0365
BAS0365
single gene
DOOR ID:
1603919
BAS0365
View Structure
13
399332-399434
(+)
TPP
399533-399854 (+)
BAS0366
BAS0366
Operon
DOOR ID:
98722
BAS0366,
BAS0367,
BAS0368,
BAS0369
View Structure
14
751994-752106
(+)
TPP
752354-753050 (+)
BAS0691
BAS0691
Operon
DOOR ID:
98785
BAS0691,
BAS0692,
BAS0693,
BAS0694,
BAS0695,
BAS0696,
BAS0697,
BAS0698
(thiG)
,
BAS0699,
BAS0700
View Structure
15
752167-752270
(+)
TPP
752354-753050 (+)
BAS0691
BAS0691
Operon
DOOR ID:
98785
BAS0691,
BAS0692,
BAS0693,
BAS0694,
BAS0695,
BAS0696,
BAS0697,
BAS0698
(thiG)
,
BAS0699,
BAS0700
View Structure
16
760167-760314
(+)
ydaO-yuaA
760398-760794 (+)
BAS0701
BAS0701
Single gene
DOOR ID:
1604057
BAS0701
View Structure
17
761303-761448
(+)
ydaO-yuaA
761748-763416 (+)
BAS0703
Potassium-transporting ATPase potassium-binding subunit (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)
BAS0703
Operon
DOOR ID:
98786
BAS0703,
BAS0704,
BAS0705,
BAS0706
View Structure
18
855156-855337
(-)
lysine
853584-854955 (-)
BAS0805
BAS0805
Operon
DOOR ID:
98808
BAS0804,
BAS0805
View Structure
19
1269072-1269236
(-)
yybP-ykoY
1268185-1268986 (-)
BAS1223
BAS1223
Single gene
DOOR ID:
1604234
BAS1223
View Structure
20
1298840-1298883
(+)
PreQ1
1298976-1299639 (+)
BAS1257
7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
BAS1257
Operon
DOOR ID:
98902
BAS1257,
BAS1258,
BAS1259,
BAS1260
View Structure
21
1360932-1361113
(+)
lysine
1361293-1362610 (+)
BAS1329
BAS1329
Single gene
DOOR ID:
1604262
BAS1329
View Structure
22
1362726-1362834
(+)
SAM
1363136-1363817 (+)
BAS1330
Phosphoadenosine phosphosulfate reductase (3'-phosphoadenylylsulfate reductase) (PAPS reductase; thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)
BAS1330
Operon
DOOR ID:
98916
BAS1330,
BAS1331
(sat)
,
BAS1332,
BAS1333,
BAS1334,
BAS1335,
BAS1336,
BAS1337
View Structure
23
1375419-1375524
(+)
SAM
1375619-1376936 (+)
BAS1343
BAS1343
Single gene
DOOR ID:
1604265
BAS1343
View Structure
24
1422634-1422773
(+)
FMN
1422934-1423513 (+)
BAS1391
BAS1391
Single gene
DOOR ID:
1604283
BAS1391
View Structure
25
1497645-1497746
(+)
purine
1497853-1498447 (+)
BAS1475
Xanthine phosphoribosyltransferase (XPRTase) (2)
BAS1475
Operon
DOOR ID:
98944
BAS1475,
BAS1476
View Structure
26
1510474-1510637
(+)
ykoK
1510982-1511708 (+)
BAS1488
BAS1488
Operon
DOOR ID:
98947
BAS1488,
BAS1489
View Structure
27
1542476-1542520
(+)
PreQ1
1542526-1543012 (+)
BAS1509
BAS1509
Operon
DOOR ID:
98951
BAS1509,
BAS1510
View Structure
28
1696714-1696900
(-)
lysine
1695284-1696514 (-)
BAS1676
BAS1676
Single gene
DOOR ID:
1604341
BAS1676
View Structure
29
1768168-1768314
(+)
ydaO-yuaA
1768457-1770284 (+)
BAS1747
BAS1747
Operon
DOOR ID:
99000
BAS1747,
BAS1748
View Structure
30
2221602-2221721
(-)
glycine
2220126-2221494 (-)
BAS2217
BAS2217
Single gene
DOOR ID:
1604515
BAS2217
View Structure
31
2433643-2433748
(+)
TPP
2433871-2434561 (+)
BAS2436
BAS2436
Single gene
DOOR ID:
1604600
BAS2436
View Structure
32
2459412-2459527
(+)
SAM
2459666-2460215 (+)
BAS2460
BAS2460
Operon
DOOR ID:
99147
BAS2460,
BAS2461,
BAS2462
View Structure
33
2834111-2834303
(+)
lysine
2834415-2835882 (+)
BAS2862
BAS2862
Operon
DOOR ID:
99232
BAS2862,
BAS2863,
BAS2864
View Structure
34
2953819-2953920
(-)
SAM
2952524-2953730 (-)
BAS2981
BAS2981
Single gene
DOOR ID:
1604772
BAS2981
View Structure
35
3092274-3092372
(-)
SAM
3091913-3092183 (-)
BAS3114
BAS3114
Single gene
DOOR ID:
1604826
BAS3114
View Structure
36
3137586-3137727
(+)
ydaO-yuaA
3138023-3138779 (-)
BAS3164
BAS3164
Operon
DOOR ID:
99291
BAS3164,
BAS3165
View Structure
37
3605892-3605993
(-)
purine
3604933-3605659 (-)
BAS3644
BAS3644
Operon
DOOR ID:
99391
BAS3638,
BAS3639,
BAS3641,
BAS3642,
BAS3643,
BAS3644
View Structure
38
3859724-3859912
(+)
cobalamin
3860039-3862328 (+)
BAS3912
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
BAS3912
Single gene
DOOR ID:
1605050
BAS3912
View Structure
39
3891097-3891238
(-)
SAM
3889824-3891006 (-)
mtnK
Methylthioribose kinase (MTR kinase) (00)
BAS3943
Operon
DOOR ID:
99450
BAS3942
(mtnA)
,
BAS3943
(mtnK)
View Structure
40
3893431-3893538
(+)
SAM
3893602-3894847 (+)
mtnW
2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)
BAS3946
Operon
DOOR ID:
99451
BAS3946
(mtnW)
,
BAS3947
(mtnX)
,
BAS3948
(mtnB)
,
BAS3949
View Structure
41
3954385-3954528
(+)
FMN
3954839-3955952 (+)
BAS4018
BAS4018
Operon
DOOR ID:
99467
BAS4018,
BAS4019,
BAS4020,
BAS4021
(ribH)
View Structure
42
3963927-3963989
(-)
glutamine
3962458-3963187 (-)
bioD
ATP-dependent dethiobiotin synthetase BioD (DTB synthetase) (DTBS) (Dethiobiotin synthase)
BAS4027
Operon
DOOR ID:
99468
BAS4023,
BAS4024,
BAS4025,
BAS4026,
BAS4027
(bioD)
,
BAS4028,
BAS4029
View Structure
43
4074471-4074580
(-)
SAM
4072567-4074400 (-)
BAS4157
BAS4157
Operon
DOOR ID:
99494
BAS4152,
BAS4153,
BAS4154,
BAS4155
(murG)
,
BAS4156,
BAS4157
View Structure
44
4074783-4074892
(+)
SAM
4074986-4076099 (+)
BAS4158
BAS4158
Operon
DOOR ID:
99495
BAS4158,
BAS4159,
BAS4160
View Structure
45
4554783-4554904
(-)
SAM
4553413-4554613 (-)
BAS4660
S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
BAS4660
Single gene
DOOR ID:
1605230
BAS4660
View Structure
46
4590648-4590749
(+)
TPP
4590835-4591504 (+)
BAS4705
BAS4705
Single gene
DOOR ID:
1605247
BAS4705
View Structure
47
4741205-4741312
(-)
SAM
4739880-4740906 (-)
BAS4855
Methionine import ATP-binding protein MetN 3
BAS4855
Operon
DOOR ID:
99652
BAS4852,
BAS4853,
BAS4854,
BAS4855
View Structure
48
4825068-4825127
(+)
fluoride
4825172-4825586 (+)
ccrB
Putative fluoride ion transporter CrcB 1
BAS4941
Operon
DOOR ID:
99676
BAS4941
(ccrB)
,
BAS4942
(ccrB)
View Structure
49
4954724-4954839
(-)
TPP
4952850-4954611 (-)
BAS5076
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
BAS5076
Single gene
DOOR ID:
1605349
BAS5076
View Structure
50
5141590-5141695
(-)
SAM
5140198-5141497 (-)
BAS5258
BAS5258
Operon
DOOR ID:
99743
BAS5257,
BAS5258
View Structure
Genome:
Bacillus anthracis str. Sterne
(
NC_005945.1
);
Phylum:
Firmicutes
a:51:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_005945.1";i:2;s:31:"Bacillus anthracis str. Sterne ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"157528-157683";i:6;s:1:"+";i:7;s:4:"glmS";i:8;s:0:"";i:9;s:13:"157874-159677";i:10;s:1:"+";i:11;s:7:"BAS0160";i:12;s:240:"Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)";i:13;s:7:"BAS0160";i:14;s:6:"Operon";i:15;s:5:"98685";i:16;s:15:"BAS0159;BAS0160";i:17;s:99:"carbohydrate derivative biosynthetic process [GO:1901137]; glutamine metabolic process [GO:0006541]";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_005945.1";i:2;s:31:"Bacillus anthracis str. Sterne ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"177161-177275";i:6;s:1:"-";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:13:"176262-177075";i:10;s:1:"-";i:11;s:7:"BAS0177";i:12;s:0:"";i:13;s:7:"BAS0177";i:14;s:6:"Operon";i:15;s:5:"98689";i:16;s:23:"BAS0175;BAS0176;BAS0177";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_005945.1";i:2;s:31:"Bacillus anthracis str. Sterne ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"185585-185690";i:6;s:1:"+";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:13:"185820-186744";i:10;s:1:"+";i:11;s:7:"BAS0186";i:12;s:0:"";i:13;s:7:"BAS0186";i:14;s:6:"Operon";i:15;s:5:"98691";i:16;s:39:"BAS0186;BAS0187;BAS0188;BAS0189;BAS0190";i:17;s:0:"";i:18;s:15:"View Structure ";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_005945.1";i:2;s:31:"Bacillus anthracis str. Sterne ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"197082-197188";i:6;s:1:"-";i:7;s:3:"SAM";i:8;s:0:"";i:9;s:13:"195308-196949";i:10;s:1:"-";i:11;s:7:"BAS0196";i:12;s:0:"";i:13;s:7:"BAS0196";i:14;s:11:"Single gene";i:15;s:7:"1603842";i:16;s:7:"BAS0196";i:17;s:0:"";i:18;s:15:"View Structure ";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_005945.1";i:2;s:31:"Bacillus anthracis str. Sterne ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"260654-260755";i:6;s:1:"+";i:7;s:6:"purine";i:8;s:0:"";i:9;s:13:"260911-262459";i:10;s:1:"+";i:11;s:4:"guaA";i:12;s:83:"GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)";i:13;s:7:"BAS0254";i:14;s:11:"Single gene";i:15;s:7:"1603872";i:16;s:13:"BAS0254(guaA)";i:17;s:79:"glutamine metabolic process [GO:0006541]; GMP biosynthetic process [GO:0006177]";i:18;s:15:"View Structure ";}i:6;a:19:{i:0;i:6;i:1;s:11:"NC_005945.1";i:2;s:31:"Bacillus anthracis str. Sterne ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"262614-262715";i:6;s:1:"+";i:7;s:6:"purine";i:8;s:0:"";i:9;s:13:"262843-264169";i:10;s:1:"+";i:11;s:7:"BAS0255";i:12;s:0:"";i:13;s:7:"BAS0255";i:14;s:11:"Single gene";i:15;s:7:"1603873";i:16;s:7:"BAS0255";i:17;s:0:"";i:18;s:15:"View Structure ";}i:7;a:19:{i:0;i:7;i:1;s:11:"NC_005945.1";i:2;s:31:"Bacillus anthracis str. Sterne ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"295344-295445";i:6;s:1:"+";i:7;s:6:"purine";i:8;s:0:"";i:9;s:13:"295554-296040";i:10;s:1:"+";i:11;s:7:"BAS0275";i:12;s:0:"";i:13;s:7:"BAS0275";i:14;s:6:"Operon";i:15;s:5:"98707";i:16;s:107:"BAS0275;BAS0276;BAS0277;BAS0278;BAS0279;BAS0280;BAS0281;BAS0282;BAS0283;BAS0284(purN);BAS0285(purH);BAS0286";i:17;s:0:"";i:18;s:15:"View Structure ";}i:8;a:19:{i:0;i:8;i:1;s:11:"NC_005945.1";i:2;s:31:"Bacillus anthracis str. 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