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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
302202-302311
(+)
TPP
302381-303002 (+)
TTC0315
TTC0315
Operon
DOOR ID:
97508
TTC0315,
TTC0316
(thiS)
,
TTC0317
(thiG)
,
TTC0318,
TTC0319
(thiC)
,
TTC0320,
TTC0321
View Structure
2
351941-352065
(-)
MOCO
350406-351081 (-)
modB
TTC0364
Operon
DOOR ID:
97516
TTC0363,
TTC0364
(modB)
,
TTC0365
View Structure
3
379701-379860
(+)
cobalamin
379992-380847 (+)
TTC0390
TTC0390
Operon
DOOR ID:
97524
TTC0390,
TTC0391
(fecD)
,
TTC0392
(fecE)
,
TTC0393,
TTC0394,
TTC0395,
TTC0396
View Structure
4
397424-397560
(-)
SAM
396020-397286 (-)
TTC0408
TTC0408
Operon
DOOR ID:
97528
TTC0405,
TTC0406,
TTC0407,
TTC0408
View Structure
5
684423-684544
(-)
FMN
683285-684419 (-)
ribD
TTC0699
Operon
DOOR ID:
97591
TTC0697
(ribA)
,
TTC0698,
TTC0699
(ribD)
View Structure
6
1376062-1376155
(-)
TPP
1375004-1376039 (-)
TTC1456
TTC1456
Operon
DOOR ID:
97749
TTC1455,
TTC1456
View Structure
Genome:
Thermus thermophilus HB27
(
NC_005835.1
);
Phylum:
Deinococcus-Thermus
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