Genome: Pseudomonas syringae pv. phaseolicola 1448A (NC_005773.3); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 515261-515371 (-)SAH513827-515237 (-)ahcY

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		PSPPH_0451Single gene

DOOR ID: 1595629		PSPPH_0451 (ahcY) View Structure
2 628566-628670 (+)TPP628825-630715 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		PSPPH_0535Single gene

DOOR ID: 1596417		PSPPH_0535 (thiC) View Structure
3 1224781-1224974 (-)yybP-ykoY1224182-1224767 (-)PSPPH_1036

PSPPH_1036Single gene

DOOR ID: 1597014		PSPPH_1036 View Structure
4 2581830-2582044 (-)cobalamin2580831-2581647 (-)PSPPH_2223

Membrane protein; putative		PSPPH_2223Operon

DOOR ID: 95039		PSPPH_2221 (cobM),
PSPPH_2222,
PSPPH_2223		 View Structure
5 2582103-2582326 (+)cobalamin2582359-2583505 (+)PSPPH_2224

Cobalamin synthesis protein/P47K family protein		PSPPH_2224Operon

DOOR ID: 95040		PSPPH_2224,
PSPPH_2225 (cobN),
PSPPH_2226 (bchI)		 View Structure
6 3489261-3489461 (+)cobalamin3490600-3491623 (+)PSPPH_3007

Iron ABC transporter; permease protein; putative		PSPPH_3007Operon

DOOR ID: 95171		PSPPH_3006,
PSPPH_3007,
PSPPH_3008,
PSPPH_3009		 View Structure
7 3758011-3758103 (+)SAH3759300-3759915 (+)PSPPH_3244

Transcriptional regulator; TetR family		PSPPH_3244Single gene

DOOR ID: 1597492		PSPPH_3244 View Structure
8 4052292-4052458 (+)FMN4052584-4053097 (+)ribH

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)		PSPPH_3514Single gene

DOOR ID: 1595381		PSPPH_3514 (ribH) View Structure
9 4096366-4096530 (+)yybP-ykoY4096537-4097107 (+)PSPPH_3559

Putative manganese efflux pump MntP		PSPPH_3559Single gene

DOOR ID: 1595541		PSPPH_3559 View Structure
10 4249518-4249732 (-)cobalamin4248815-4249427 (-)cobO

Cob(I)yrinic acid a;c-diamide adenosyltransferase (7) (Cob(I)alamin adenosyltransferase) (Corrinoid adenosyltransferase)		PSPPH_3702Operon

DOOR ID: 95294		PSPPH_3693 (cobS),
PSPPH_3694,
PSPPH_3695 (cobT),
PSPPH_3696 (cobU),
PSPPH_3697 (cobQ),
PSPPH_3698,
PSPPH_3699 (cobD),
PSPPH_3700,
PSPPH_3701,
PSPPH_3702 (cobO)		 View Structure
11 4531598-4531700 (+)ykkC-yxkD4531763-4532831 (+)PSPPH_3971

ABC transporter; periplasmic substrate-binding protein		PSPPH_3971Operon

DOOR ID: 95350		PSPPH_3971,
PSPPH_3972,
PSPPH_3973,
PSPPH_3974		 View Structure
12 4535822-4535869 (+)mini-ykkC4535914-4539715 (+)PSPPH_3975

PSPPH_3975Operon

DOOR ID: 95351		PSPPH_3975,
PSPPH_3976,
PSPPH_3977		 View Structure