RiboswitchDB

Genome: Mycoplasma mycoides subsp. mycoides SC str. PG1 (NC_005364.2); Phylum: Tenericutes

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

557985-558080 (+)

SAM

558153-559317 (+)

metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)

Operon

DOOR ID: 94459

MSC_0492 (metK),
MSC_0493 (cut),
MSC_0494 (gid),
MSC_0495 (pmi),
MSC_0496 (ung),
MSC_0497 (cbf)

2

893820-893910 (-)

TPP

892291-893764 (-)

phnD

Alkylphosphonate ABC transporter; substrate-bindin

Operon

DOOR ID: 94524

MSC_0788 (phnB),
MSC_0789 (phnC),
MSC_0790 (phnD)

3

909758-909848 (-)

TPP

908268-909702 (-)

abc

ABC TRANSPORTER; substrate-binding component

Operon

DOOR ID: 94527

MSC_0803 (phnC),
MSC_0804 (abc)

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