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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
98247-98337
(-)
TPP
97632-98196 (-)
LJ0074
LJ0074
Operon
DOOR ID:
93205
LJ0072,
LJ0073,
LJ0074
View Structure
2
111246-111419
(-)
lysine
109517-111131 (-)
LJ0087
LJ0087
Operon
DOOR ID:
93209
LJ0086,
LJ0087
View Structure
3
231904-232076
(+)
ykoK
232145-233177 (+)
LJ0201
LJ0201
Operon
DOOR ID:
93235
LJ0201,
LJ0202,
LJ0203,
LJ0204,
LJ0205
(ksgA)
View Structure
4
263049-263147
(-)
purine
262399-262978 (-)
LJ0227
LJ0227
Operon
DOOR ID:
93241
LJ0226,
LJ0227
View Structure
5
564018-564088
(+)
SMK_box
565283-566741 (+)
LJ0678
LJ0678
Operon
DOOR ID:
93298
LJ0677,
LJ0678
View Structure
6
798633-798695
(+)
fluoride
798783-799599 (+)
LJ0895
LJ0895
Operon
DOOR ID:
93347
LJ0895,
LJ0896,
LJ0897
View Structure
7
991108-991219
(+)
FMN
991301-991895 (+)
LJ1088
LJ1088
Single gene
DOOR ID:
1593328
LJ1088
View Structure
8
1073421-1073588
(+)
ykoK
1073604-1076343 (+)
LJ1155
LJ1155
Single gene
DOOR ID:
1593354
LJ1155
View Structure
9
1172571-1172633
(-)
fluoride
1171208-1172495 (-)
eno
LJ1246
Single gene
DOOR ID:
1593383
LJ1246
(eno)
View Structure
10
1949387-1949484
(+)
purine
1949565-1950879 (+)
LJ1830
LJ1830
Single gene
DOOR ID:
1593596
LJ1830
View Structure
Genome:
Lactobacillus johnsonii NCC 533
(
NC_005362.1
);
Phylum:
Firmicutes
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