RiboswitchDB

Genome: Synechococcus sp. WH 8102 (NC_005070.1); Phylum: Cyanobacteria/Melainabacteria group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

134905-135013 (+)

TPP

136579-138589 (-)

tktA

Transketolase

Operon

DOOR ID: 86346

SYNW0141 (tktA),
SYNW0142 (fabF),
SYNW0143 (acpP)

2

1383854-1383952 (+)

ykkC-yxkD

1385171-1385570 (+)

hypA2

Putative hydrogenase expression/formation protein HypA2

Operon

DOOR ID: 86635

SYNW1412,
SYNW1413 (hypA2),
SYNW1414 (hypB),
SYNW1415,
SYNW1416,
SYNW1417,
SYNW1418

3

2014314-2014462 (+)

cobalamin

2015108-2016641 (+)

som

Possible porin

Operon

DOOR ID: 86792

SYNW2127 (hupE),
SYNW2128 (som)

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";}}