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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
160896-161080
(-)
cobalamin
159516-160686 (-)
cbiX
Ferredoxin-related protein
LB_165
Operon
DOOR ID:
70273
LB_149
(pmgA)
,
LB_150
(cobD)
,
LB_151
(cbiP)
,
LB_152
(cobP)
,
LB_153,
LB_154
(cbiA)
,
LB_155
(cobA)
,
LB_156
(cbiF)
,
LB_157
(cbiH)
,
LB_158
(cbiG)
,
LB_159
(cobI)
,
LB_160
(cbiE)
,
LB_161
(cbiC)
,
LB_162
(cbiD)
,
LB_163,
LB_164,
LB_165
(cbiX)
View Structure
Genome:
Leptospira interrogans serovar Lai str. 56601 chromosome II
(
NC_004343.2
);
Phylum:
Spirochaetia
a:2:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_004343.2";i:2;s:59:"Leptospira interrogans serovar Lai str. 56601 chromosome II";i:3;s:12:"Spirochaetia";i:4;s:6:"203692";i:5;s:13:"160896-161080";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"159516-160686";i:10;s:1:"-";i:11;s:4:"cbiX";i:12;s:26:"Ferredoxin-related protein";i:13;s:6:"LB_165";i:14;s:6:"Operon";i:15;s:5:"70273";i:16;s:202:"LB_149(pmgA);LB_150(cobD);LB_151(cbiP);LB_152(cobP);LB_153;LB_154(cbiA);LB_155(cobA);LB_156(cbiF);LB_157(cbiH);LB_158(cbiG);LB_159(cobI);LB_160(cbiE);LB_161(cbiC);LB_162(cbiD);LB_163;LB_164;LB_165(cbiX)";i:17;s:43:"cobalamin biosynthetic process [GO:0009236]";i:18;s:15:"View Structure ";}}