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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
55434-55585
(-)
FMN
54773-55427 (-)
BL0044
Riboflavin transporter
BL0044
Single gene
DOOR ID:
1520631
BL0044
View Structure
2
140900-141008
(-)
TPP
137128-139882 (-)
thiE%2FthiC
Thiamine biosynthesis bifunctional protein Thi7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)]
BL0114
Single gene
DOOR ID:
1520670
BL0114
(thiE/thiC)
View Structure
3
586261-586429
(-)
TPP
585226-585523 (-)
BL0803
BL0803
Operon
DOOR ID:
67801
BL0803,
BL0804
View Structure
4
885043-885146
(-)
TPP
884673-884868 (-)
thiS
BL1055a
Operon
DOOR ID:
67849
BL1053a,
BL1054
(thiF)
,
BL1055
(thiG)
,
BL1055a
(thiS)
View Structure
5
903184-903288
(-)
TPP
902479-903079 (-)
BL1071
BL1071
Operon
DOOR ID:
67852
BL1069,
BL1070,
BL1071
View Structure
6
925740-925809
(+)
fluoride
925871-926408 (+)
BL1091
Putative fluoride ion transporter CrcB 2
BL1091
Operon
DOOR ID:
67855
BL1091,
BL1092,
BL1093
View Structure
7
1479277-1479373
(-)
TPP
1477876-1479229 (-)
BL0515
Hypothetical transmembrane protein in xanthine/uracil permeases family
BL0515
Operon
DOOR ID:
67934
BL0513,
BL0514,
BL0515
View Structure
Genome:
Bifidobacterium longum NCC2705
(
NC_004307.2
);
Phylum:
Actinobacteria
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