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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
545553-545597
(-)
PreQ1
544425-545409 (-)
SAG0528
Inosine-uridine preferring nucleoside hydrolase
SAG0528
Operon
DOOR ID:
1306471
SAG0527,
SAG0528
View Structure
2
739286-739400
(+)
FMN
739593-740703 (+)
ribD
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
SAG0746
Operon
DOOR ID:
1306510
SAG0746
(ribD)
,
SAG0747
(ribE)
,
SAG0748
(ribA)
,
SAG0749
(ribH)
View Structure
3
815768-815866
(-)
TPP
815146-815710 (-)
SAG0817
Membrane protein; putative
SAG0817
Single gene
DOOR ID:
1516168
SAG0817
View Structure
4
835190-835279
(+)
TPP
835434-836001 (+)
SAG0835
SAG0835
Operon
DOOR ID:
1306526
SAG0835,
SAG0836,
SAG0837,
SAG0838
View Structure
5
847184-847297
(+)
preQ1-II
847943-849902 (+)
ligA
DNA ligase (Polydeoxyribonucleotide synthase [NAD(+)])
SAG0850
Operon
DOOR ID:
1306529
SAG0850
(ligA)
,
SAG0851,
SAG0852
View Structure
6
1094210-1094305
(-)
purine
1093523-1094105 (-)
xpt
Xanthine phosphoribosyltransferase (XPRTase) (2)
SAG1086
Operon
DOOR ID:
1306584
SAG1085
(pbuX)
,
SAG1086
(xpt)
View Structure
7
1147544-1147676
(+)
glycine
1147832-1149179 (+)
SAG1145
Sodium:alanine symporter family protein
SAG1145
Operon
DOOR ID:
1306593
SAG1145,
SAG1146
View Structure
8
1411733-1411878
(-)
FMN
1411079-1411664 (-)
SAG1403
Riboflavin transporter
SAG1403
Operon
DOOR ID:
1306654
SAG1402,
SAG1403
View Structure
Genome:
Streptococcus agalactiae 2603V/R
(
NC_004116.1
);
Phylum:
Firmicutes
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