Genome: Ruegeria pomeroyi DSS-3 (NC_003911.12); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 45973-46077 (+)TPP46121-46925 (+)thiD

Phosphomethylpyrimidine kinase 		SPO0045Operon

DOOR ID: 60861		SPO0045 (thiD),
SPO0046,
SPO0046.1 (thiS),
SPO0047 (thiG),
SPO0048 (thiE),
SPO0049,
SPO0050,
SPO0051,
SPO0052,
SPO0053		 View Structure
2 286477-286629 (-)FMN284705-285806 (-)aroC

Chorismate synthase (CS) (5-enolpyruvylshikimate-3-phosphate phospholyase)		SPO0267Operon

DOOR ID: 60905		SPO0265,
SPO0266,
SPO0267 (aroC)		 View Structure
3 1410075-1410152 (+)sam-alpha1410219-1411410 (+)metZ

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase) 		SPO1351Single gene

DOOR ID: 1505264		SPO1351 (metZ) View Structure
4 3058879-3059102 (+)cobalamin3059171-3059570 (+)SPO2861

SPO2861Operon

DOOR ID: 61452		SPO2861,
SPO2862,
SPO2863 (cobN),
SPO2864,
SPO2865 (cobH),
SPO2866 (cobI),
SPO2867 (cobJ)		 View Structure
5 3073052-3073264 (+)cobalamin3073274-3073469 (+)SPO2875

SPO2875Operon

DOOR ID: 61454		SPO2875,
SPO2876		 View Structure
6 3757893-3758105 (+)cobalamin3758144-3758588 (+)SPO3547

SPO3547Single gene

DOOR ID: 1505984		SPO3547 View Structure