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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
542010-542140
(-)
cobalamin
539126-539831 (-)
all0455
Cobalamin biosynthesis precorrin-2 methyltransferase
all0455
Operon
DOOR ID:
50213
all0455,
all0456
View Structure
2
1148746-1148842
(-)
TPP
1147364-1148738 (-)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
all0982
Single gene
DOOR ID:
1471139
all0982
(thiC)
View Structure
3
2140008-2140185
(-)
cobalamin
2139598-2139991 (-)
all1781
All1781 protein
all1781
Single gene
DOOR ID:
1471704
all1781
View Structure
4
2723228-2723309
(+)
fluoride
2723404-2725036 (+)
alr2264
Na+/H+-exchanging protein
alr2264
Single gene
DOOR ID:
1472009
alr2264
View Structure
5
3675330-3675547
(-)
ydaO-yuaA
3674570-3675275 (-)
all3034
All3034 protein
all3034
Single gene
DOOR ID:
1472482
all3034
View Structure
6
3677278-3677501
(-)
ydaO-yuaA
3676832-3677180 (-)
all3036
All3036 protein
all3036
Single gene
DOOR ID:
1472484
all3036
View Structure
7
4078676-4078826
(+)
ydaO-yuaA
4078965-4080255 (+)
alr3370
Alr3370 protein
alr3370
Single gene
DOOR ID:
1472680
alr3370
View Structure
8
4851919-4852062
(+)
cobalamin
4852465-4852876 (+)
alr4027
Alr4027 protein
alr4027
Single gene
DOOR ID:
1473120
alr4027
View Structure
9
5415286-5415500
(+)
ydaO-yuaA
5415908-5416151 (+)
asr4524
Asr4524 protein
asr4524
Single gene
DOOR ID:
1473430
asr4524
View Structure
Genome:
Nostoc sp. PCC 7120
(
NC_003272.1
);
Phylum:
Cyanobacteria/Melainabacteria group
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