Genome: Yersinia pestis CO92 (NC_003143.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 366347-366393 (+)mini-ykkC366412-366727 (+)sugE

YPO0355Single gene

DOOR ID: 1458037
YPO0355 (sugE) View Structure
2 567061-567198 (-)TPP565993-566986 (-)tbpA

Thiamine-binding periplasmic protein

DOOR ID: 44196
YPO0520 (thiQ),
YPO0521 (thiP),
YPO0522 (tbpA)
View Structure
3 717671-717860 (+)FMN718101-718755 (+)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
YPO0658Single gene

DOOR ID: 1458168
YPO0658 (ribB) View Structure
4 1306720-1306866 (+)MOCO1307933-1308413 (+)moaC

Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)

DOOR ID: 44323
YPO1159 (moaA),
YPO1160 (moaC),
YPO1161 (moaD),
YPO1162 (moaE)
View Structure
5 1999916-2000115 (-)yybP-ykoY1999335-1999905 (-)yebN

Putative manganese efflux pump MntP
YPO1754Single gene

DOOR ID: 1458644
YPO1754 (yebN) View Structure
6 2918170-2918233 (-)fluoride2917685-2918069 (-)crcB

Putative fluoride ion transporter CrcB 1
YPO2596Single gene

DOOR ID: 1459017
YPO2596 (crcB) View Structure
7 3197047-3197151 (-)TPP3196122-3196923 (-)thiD

Putative phosphomethylpyrimidine kinase
YPO2859Single gene

DOOR ID: 1459119
YPO2859 (thiD) View Structure
8 4190343-4190468 (+)TPP4190601-4192647 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 44789
YPO3739 (thiC),
YPO3740 (thiE),
YPO3741 (thiF)
View Structure
9 4392988-4393250 (-)cobalamin4391023-4392919 (-)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 44825
YPO3909 (murI),
YPO3910 (btuB)
View Structure