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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
312774-312876
(+)
TPP
313001-313787 (+)
Atu3286
ABC transporter; membrane spanning protein
Atu3286
Single gene
DOOR ID:
1452145
Atu3286
View Structure
2
441124-441359
(-)
cobalamin
439934-440966 (-)
Atu3396
ABC transporter; substrate binding protein (Iron)
Atu3396
Operon
DOOR ID:
41168
Atu3394
(fecE)
,
Atu3395,
Atu3396
View Structure
3
921705-921914
(+)
cobalamin
922010-922841 (+)
Atu3826
Acyl-CoA hydrolase
Atu3826
Operon
DOOR ID:
41253
Atu3826,
Atu3827,
Atu3828
View Structure
Genome:
Agrobacterium fabrum str. C58 chromosome linear
(
NC_003063.2
);
Phylum:
Alphaproteobacteria
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