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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
171572-171686
(-)
FMN
170337-171438 (-)
SP_0178
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
SP_0178
Operon
DOOR ID:
38501
SP_0175
(ribH)
,
SP_0176,
SP_0177,
SP_0178
View Structure
2
387494-387582
(+)
glycine
387672-388995 (+)
SP_0408
Sodium:alanine symporter family protein
SP_0408
Single gene
DOOR ID:
1446466
SP_0408
View Structure
3
467152-467386
(+)
FMN
467550-468114 (+)
SP_0488
Riboflavin transporter
SP_0488
Operon
DOOR ID:
38562
SP_0488,
SP_0489,
SP_0490,
SP_0491,
SP_0492
View Structure
4
681820-681908
(+)
TPP
682122-682791 (+)
SP_0716
Aminopyrimidine aminohydrolase
SP_0716
Single gene
DOOR ID:
1446557
SP_0716
View Structure
5
684650-684738
(+)
TPP
684999-685560 (+)
SP_0719
SP_0719
Operon
DOOR ID:
38614
SP_0719,
SP_0720,
SP_0721
View Structure
6
691343-691441
(-)
TPP
690467-691259 (-)
SP_0726
Phosphomethylpyrimidine kinase
SP_0726
Single gene
DOOR ID:
1446558
SP_0726
View Structure
7
1754791-1754886
(+)
purine
1755276-1755858 (+)
SP_1847
Xanthine phosphoribosyltransferase (XPRTase) (2)
SP_1847
Operon
DOOR ID:
38850
SP_1847,
SP_1848
View Structure
8
2121275-2121377
(-)
TPP
2120913-2121204 (-)
SP_2199
SP_2199
Operon
DOOR ID:
38922
SP_2196,
SP_2197,
SP_2198,
SP_2199
View Structure
Genome:
Streptococcus pneumoniae TIGR4
(
NC_003028.3
);
Phylum:
Firmicutes
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