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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
144199-144281
(-)
SAH
142709-144128 (-)
ahcY
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
MCA0138
Single gene
DOOR ID:
1444930
MCA0138
(ahcY)
View Structure
2
2108776-2109013
(+)
cobalamin
2109112-2111029 (+)
MCA1957
Putative TonB-dependent receptor
MCA1957
Single gene
DOOR ID:
1445347
MCA1957
View Structure
3
2496682-2496912
(-)
cobalamin
2496388-2496658 (-)
MCA2302
MCA2302
Single gene
DOOR ID:
1445232
MCA2302
View Structure
4
2895500-2895597
(+)
TPP
2895661-2897536 (+)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
MCA2710
Operon
DOOR ID:
38156
MCA2710
(thiC)
,
MCA2711
(cyp51)
,
MCA2712,
MCA2713
View Structure
Genome:
Methylococcus capsulatus str. Bath
(
NC_002977.6
);
Phylum:
Gammaproteobacteria
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