Genome: Staphylococcus epidermidis RP62A (NC_002976.3); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 54816-54918 (+)purine55200-55779 (+)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)		SERP0067Operon

DOOR ID: 37143		SERP0067 (xpt),
SERP0068 (pbuX),
SERP0069 (guaB)		 View Structure
2 212181-212280 (-)TPP211326-212079 (-)fabG

3-oxoacyl-(Acyl-carrier-protein) reductase; putative		SERP0201Operon

DOOR ID: 37168		SERP0200,
SERP0201 (fabG)		 View Structure
3 370878-370924 (-)PreQ1370074-370746 (-)SERP0373

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		SERP0373Operon

DOOR ID: 37206		SERP0371,
SERP0372,
SERP0373		 View Structure
4 480767-480869 (+)SAM480962-481988 (+)SERP0489

Methionine import ATP-binding protein MetN 2 		SERP0489Operon

DOOR ID: 37229		SERP0489,
SERP0490,
SERP0491		 View Structure
5 603524-603647 (+)yybP-ykoY603718-604525 (+)SERP0610

Integral membrane protein; TerC family		SERP0610Single gene

DOOR ID: 1444398		SERP0610 View Structure
6 658445-658547 (-)TPP657784-658360 (-)SERP0662

SERP0662Operon

DOOR ID: 37257		SERP0660,
SERP0661,
SERP0662		 View Structure
7 981298-981477 (+)lysine981560-982763 (+)lysC

Aspartokinase 		SERP0963Operon

DOOR ID: 37319		SERP0963 (lysC),
SERP0964 (asd),
SERP0965 (dapA),
SERP0966 (dapB),
SERP0967 (dapD)		 View Structure
8 1099435-1099570 (-)FMN1098832-1099372 (-)SERP1053

Riboflavin transporter		SERP1053Single gene

DOOR ID: 1444534		SERP1053 View Structure
9 1146870-1147012 (-)glycine1145699-1146791 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		SERP1102Operon

DOOR ID: 37354		SERP1100,
SERP1101,
SERP1102 (gcvT)		 View Structure
10 1281369-1281544 (-)lysine1279660-1281163 (-)SERP1245

Amino acid permease family protein		SERP1245Single gene

DOOR ID: 1444581		SERP1245 View Structure
11 1389935-1390073 (-)FMN1388742-1389786 (-)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		SERP1328Operon

DOOR ID: 37398		SERP1325 (ribH),
SERP1326 (ribBA),
SERP1327 (ribE),
SERP1328 (ribD)		 View Structure
12 1409628-1409737 (-)SAM1408319-1409519 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		SERP1352Single gene

DOOR ID: 1444633		SERP1352 (metK) View Structure
13 1744077-1744175 (-)TPP1743315-1744005 (-)SERP1701

Aminopyrimidine aminohydrolase (Thiaminase II)		SERP1701Operon

DOOR ID: 37474		SERP1698 (thiE),
SERP1699 (thiM),
SERP1700 (thiD-2),
SERP1701		 View Structure
14 1799011-1799228 (-)glmS1797036-1798842 (-)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		SERP1760Operon

DOOR ID: 37484		SERP1760 (glmS),
SERP1761		 View Structure
15 1935405-1935501 (-)SAM1933969-1935271 (-)SERP1914

Na+/H+ antiporter; putative		SERP1914Single gene

DOOR ID: 1444809		SERP1914 View Structure
16 2096235-2096344 (+)TPP2096554-2097013 (+)SERP2070

Thiamine-phosphate pyrophosphorylase; putative		SERP2070Operon

DOOR ID: 37532		SERP2070,
SERP2071,
SERP2072 (thiS),
SERP2073 (thiG),
SERP2074		 View Structure
17 2366921-2367022 (+)TPP2367077-2367989 (+)SERP2330

Thiamine biosynthesis protein; putative		SERP2330Single gene

DOOR ID: 1444045		SERP2330 View Structure
18 2600619-2600719 (-)SAM2599585-2600554 (-)SERP2541

Homoserine O-acetyltransferase; putative		SERP2541Single gene

DOOR ID: 1444092		SERP2541 View Structure