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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
79231-79321
(-)
glycine
77645-78923 (-)
glyA
Mb0071c
Operon
DOOR ID:
31256
Mb0070c
(sdaA)
,
Mb0071c
(glyA)
View Structure
2
308010-308183
(-)
cobalamin
306201-307872 (-)
PPE2
Mb0262c
Operon
DOOR ID:
31295
Mb0260c
(cobU)
,
Mb0261c
(cobQ1)
,
Mb0262c
(PPE2)
View Structure
3
502066-502176
(+)
TPP
503185-503392 (+)
thiS
Mb0424
Operon
DOOR ID:
31328
Mb0423
(thiO)
,
Mb0424
(thiS)
,
Mb0425
(thiG)
View Structure
4
511235-511345
(-)
TPP
508776-509574 (-)
thiD
Mb0430c
Operon
DOOR ID:
31329
Mb0429c,
Mb0430c
(thiD)
,
Mb0431c
(thiC)
View Structure
5
966005-966227
(-)
ydaO-yuaA
965011-965995 (-)
rpfA
Mb0891c
Single gene
DOOR ID:
1433144
Mb0891c
(rpfA)
View Structure
6
1262850-1263068
(-)
cobalamin
1260437-1262717 (-)
metE
Mb1164c
Single gene
DOOR ID:
1433254
Mb1164c
(metE)
View Structure
7
1719522-1719691
(+)
ykoK
1719988-1720225 (+)
Mb1562
Mb1562
Single gene
DOOR ID:
1433402
Mb1562
View Structure
8
2038050-2038224
(+)
ykoK
2038526-2038826 (+)
PE20
Mb1835
Operon
DOOR ID:
31643
Mb1835
(PE20)
,
Mb1836
(PPE31)
View Structure
9
2065965-2066062
(+)
glycine
2066228-2069054 (+)
gcvB
Mb1863
Operon
DOOR ID:
31648
Mb1861,
Mb1862,
Mb1863
(gcvB)
View Structure
10
3683221-3683340
(+)
SAM-IV
3683376-3684726 (+)
metC
Mb3372
Operon
DOOR ID:
31988
Mb3372
(metC)
,
Mb3373
(metX)
,
Mb3374
View Structure
Genome:
Mycobacterium bovis AF2122/97
(
NC_002945.3
);
Phylum:
Actinobacteria
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