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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
363030-363144
(+)
glycine
363277-364645 (+)
HD0461
HD0461
Operon
DOOR ID:
29432
HD0460,
HD0461
View Structure
2
428570-428635
(-)
PreQ1
427891-428566 (-)
HD0558
HD0558
Operon
DOOR ID:
29445
HD0556,
HD0557,
HD0558,
HD0560
View Structure
3
462086-462178
(+)
TPP
462240-463209 (+)
tbpA
HD0601
Operon
DOOR ID:
29452
HD0601
(tbpA)
,
HD0602
View Structure
4
943036-943169
(+)
FMN
943331-944438 (+)
ribD
HD1161
Operon
DOOR ID:
29558
HD1161
(ribD)
,
HD1162
(ribE)
,
HD1163
(ribAB)
,
HD1165
(ribH)
View Structure
5
992934-993104
(+)
lysine
994842-995427 (-)
gmhA
HD1228
Single gene
DOOR ID:
1429852
HD1228
(gmhA)
View Structure
6
1124145-1124335
(-)
lysine
1122684-1124040 (-)
lysC
HD1375
Single gene
DOOR ID:
1429885
HD1375
(lysC)
View Structure
7
1139594-1139711
(-)
MOCO
1138042-1138519 (-)
moaC
HD1391
Operon
DOOR ID:
29597
HD1386,
HD1387,
HD1389
(moaE)
,
HD1390
(moaD)
,
HD1391
(moaC)
,
HD1392
(moaA)
View Structure
8
1141155-1141327
(+)
MOCO
1141345-1143820 (+)
torZ
HD1394
Single gene
DOOR ID:
1429892
HD1394
(torZ)
View Structure
Genome:
Haemophilus ducreyi 35000HP
(
NC_002940.2
);
Phylum:
Gammaproteobacteria
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