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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
122538-122730
(+)
cobalamin
122838-123864 (+)
DET0125
Alcohol dehydrogenase; zinc-containing
DET0125
Operon
DOOR ID:
27629
DET0125
View Structure
2
300591-300734
(+)
cobalamin
300831-301614 (+)
DET0314
DET0314
Operon
DOOR ID:
27664
DET0313,
DET0314
View Structure
3
599159-599294
(+)
cobalamin
599607-600624 (+)
DET0650
ABC-type cobalamin/Fe3+-siderophores transport system; periplasmic binding protein; putative (ABC-type cobalamin/Fe3+-siderophores transport systems; periplasmic binding protein; putative)
DET0650
Single gene
DOOR ID:
1426929
DET0650
View Structure
4
605397-605595
(+)
cobalamin
605750-606809 (+)
cobT-1
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)
DET0657
Operon
DOOR ID:
27740
DET0657
(cobT-1)
,
DET0658
(cobS-1)
,
DET0659
View Structure
5
630170-630305
(+)
cobalamin
630618-631635 (+)
DET0684
ABC-type cobalamin/Fe3+-siderophores transport system; periplasmic binding protein; putative (ABC-type cobalamin/Fe3+-siderophores transport systems; periplasmic binding protein; putative)
DET0684
Single gene
DOOR ID:
1426915
DET0684
View Structure
6
636408-636606
(+)
cobalamin
636761-637820 (+)
cobT-2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)
DET0691
Operon
DOOR ID:
27746
DET0691
(cobT-2)
,
DET0692
(cobS-2)
,
DET0693
View Structure
7
713473-713568
(-)
TPP
712125-713421 (-)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
DET0775
Single gene
DOOR ID:
1426882
DET0775
(thiC)
View Structure
Genome:
Dehalococcoides ethenogenes 195
(
NC_002936.3
);
Phylum:
Chloroflexi
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