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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
409610-409822
(-)
cobalamin
408450-409248 (-)
CT0395
CT0395
Operon
DOOR ID:
26721
CT0395,
CT0396
View Structure
2
422025-422264
(+)
cobalamin
422272-422470 (-)
CT0407
CT0407
Single gene
DOOR ID:
1425014
CT0407
View Structure
3
443749-443971
(+)
cobalamin
443993-446333 (+)
CT0423
Receptor; putative
CT0423
Single gene
DOOR ID:
1425017
CT0423
View Structure
4
584163-584431
(+)
cobalamin
584743-588133 (+)
CT0578
Vitamin B12-dependent ribonucleotide reductase
CT0578
Operon
DOOR ID:
26753
CT0577,
CT0578,
CT0579
View Structure
5
606189-606295
(+)
SAM
606399-607689 (+)
cysD
O-acetylhomoserine (Thiol)-lyase (9)
CT0604
Operon
DOOR ID:
26760
CT0604
(cysD)
,
CT0605
(met2)
View Structure
6
882556-882790
(+)
cobalamin
882926-884954 (+)
CT0935
TonB-dependent receptor-related protein
CT0935
Single gene
DOOR ID:
1425233
CT0935
View Structure
7
1352467-1352573
(+)
TPP
1352636-1354307 (+)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
CT1442
Single gene
DOOR ID:
1425439
CT1442
(thiC)
View Structure
Genome:
Chlorobium tepidum TLS
(
NC_002932.3
);
Phylum:
Bacteroidetes/Chlorobi group
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