Genome: Escherichia coli O157:H7 str. EDL933 (NC_002655.2); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 80331-80430 (-)TPP79316-80300 (-)tbpA

Thiamin-binding periplasmic protein

DOOR ID: 15101
Z0075 (thiQ),
Z0076 (thiP),
Z0077 (tbpA)
View Structure
2 940930-941074 (+)MOCO942072-942585 (+)moaB

Molybdenum cofactor biosynthesis protein B

DOOR ID: 15262
Z1000 (moaA),
Z1001 (moaB),
Z1002 (moaC),
Z1003 (moaD),
Z1004 (moaE)
View Structure
3 2582491-2582592 (+)yybP-ykoY2582669-2583290 (+)Z2864

Probable manganese efflux pump MntP
Z2864Single gene

DOOR ID: 1404375
Z2864 View Structure
4 2929088-2929184 (-)TPP2928264-2929053 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)

DOOR ID: 15652
Z3264 (yegW),
Z3266 (yegX),
Z3267 (thiD),
Z3268 (thiM)
View Structure
5 3997979-3998127 (-)FMN3997221-3997875 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Z4399Single gene

DOOR ID: 1404807
Z4399 (ribB) View Structure
6 5041415-5041605 (+)cobalamin5041669-5043514 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 16055
Z5527 (btuB),
Z5528 (murI)
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7 5073751-5073851 (-)TPP5071774-5073670 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 16060
Z5564 (thiH),
Z5565 (thiG),
Z5566 (thiS),
Z5567 (thiF),
Z5568 (thiE),
Z5569 (thiC)
View Structure
8 5116571-5116767 (-)lysine5115129-5116479 (-)lysC

Z5622Single gene

DOOR ID: 1405143
Z5622 (lysC) View Structure
9 5261077-5261123 (+)mini-ykkC5261454-5261988 (-)blc


DOOR ID: 16088
Z5756 (blc),
Z5757 (ampC),
Z5758 (frdD),
Z5759 (frdC),
Z5760 (frdB),
Z5762 (frdA)
View Structure
10 5352939-5353054 (+)Mg sensor5353147-5355844 (+)mgtA

Magnesium-transporting ATPase; P-type 1 (Mg(2+) transport ATPase; P-type 1)
Z5853Single gene

DOOR ID: 1405232
Z5853 (mgtA) View Structure