Genome: Bacillus halodurans C-125 (NC_002570.2); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 288766-288933 (+)glmS289007-290810 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		BH0268Operon

DOOR ID: 1399719		BH0268 (glmS) View Structure
2 305869-306039 (+)cobalamin306122-307196 (+)BH0284

Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)		BH0284Operon

DOOR ID: 1399729		BH0284 View Structure
3 387918-387999 (+)c-di-GMP-II388025-393011 (+)BH0361

BH0361 protein		BH0361Operon

DOOR ID: 13354		BH0361,
BH0362		 View Structure
4 466726-466924 (-)cobalamin464314-466585 (-)BH0438

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		BH0438Operon

DOOR ID: 13368		BH0437,
BH0438		 View Structure
5 528874-529071 (+)cobalamin529225-531406 (+)nrdA

BH0501Operon

DOOR ID: 13383		BH0501 (nrdA),
BH0502 (nrdB)		 View Structure
6 597582-597667 (+)c-di-GMP-I597784-598153 (+)BH0563

BH0563 protein		BH0563operon

DOOR ID: 13393		BH0563,
BH0564		 View Structure
7 632283-632434 (+)ydaO-yuaA632506-633163 (+)BH0597

BH0597 protein		BH0597Operon

DOOR ID: 13398		BH0597,
BH0598		 View Structure
8 648442-648543 (+)purine648682-650224 (+)guaA

Putative GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		BH0607Single gene

DOOR ID: 1399882		BH0607 (guaA) View Structure
9 650309-650410 (+)purine650515-651820 (+)BH0608

BH0608 protein		BH0608Operon

DOOR ID: 1399883		BH0608 View Structure
10 676475-676576 (+)purine676723-677209 (+)purE

BH0623Operon

DOOR ID: 13406		BH0623 (purE),
BH0624 (purK),
BH0625 (purB),
BH0626 (purC),
BH0627,
BH0628 (purL),
BH0629 (purQ),
BH0630 (purF),
BH0631 (purM),
BH0632 (purN),
BH0633 (purH),
BH0634 (purD)		 View Structure
11 741875-741978 (-)ykkC-yxkD741479-741824 (-)BH0686

Chaperonin		BH0686Operon

DOOR ID: 13419		BH0685,
BH0686		 View Structure
12 806873-806970 (+)purine807056-808394 (+)BH0746

5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) (1)		BH0746Operon

DOOR ID: 1399936		BH0746 View Structure
13 870579-870768 (+)cobalamin870963-871437 (+)BH0798

Acyl-CoA hydrolase		BH0798Operon

DOOR ID: 1399953		BH0798 View Structure
14 902230-902329 (+)TPP902393-902954 (+)BH0830

BH0830 protein		BH0830Operon

DOOR ID: 1399965		BH0830 View Structure
15 910088-910192 (-)SAM909019-909949 (-)BH0835

BH0835 protein		BH0835Operon

DOOR ID: 1399968		BH0835 View Structure
16 1348816-1348929 (+)SAM1349025-1350279 (+)BH1253

Homoserine dehydrogenase (HDH) 		BH1253Single gene

DOOR ID: 1400151		BH1253 View Structure
17 1519534-1519642 (+)TPP1519729-1520365 (+)BH1431

Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)		BH1431Operon

DOOR ID: 13569		BH1431,
BH1432,
BH1433 (thiG),
BH1434,
BH1435		 View Structure
18 1592973-1593074 (-)purine1592272-1592869 (-)BH1514

Xanthine phosphoribosyltransferase (XPRTase) (2)		BH1514Operon

DOOR ID: 13587		BH1513,
BH1514		 View Structure
19 1619231-1619405 (+)lysine1619526-1620846 (+)BH1544

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		BH1544Single gene

DOOR ID: 1400274		BH1544 View Structure
20 1634615-1634762 (+)FMN1635052-1636159 (+)ribG

BH1554Operon

DOOR ID: 13596		BH1554 (ribG),
BH1555 (ribB),
BH1556 (ribA),
BH1557 (ribH)		 View Structure
21 1661058-1661239 (+)cobalamin1661465-1662449 (+)BH1585

Ferric ion ABC transporter (Ferric ion-binding protein)		BH1585Operon

DOOR ID: 13604		BH1585,
BH1586,
BH1587,
BH1588 (cobD),
BH1589 (cobC),
BH1590 (cobP),
BH1591 (cobQ),
BH1592 (cobS),
BH1593,
BH1594,
BH1595		 View Structure
22 1699957-1700066 (+)SAM1700238-1701375 (+)metB

BH1627Operon

DOOR ID: 13611		BH1627 (metB),
BH1628 (metC),
BH1629,
BH1630 (metH)		 View Structure
23 1819575-1819757 (-)lysine1818515-1819403 (-)dapA

4-hydroxy-tetrahydrodipicolinate synthase 1 (HTPA synthase 1) 		BH1742Single gene

DOOR ID: 1400339		BH1742 (dapA) View Structure
24 2025553-2025667 (+)TPP2025806-2027594 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		BH1933Single gene

DOOR ID: 1400417		BH1933 (thiC) View Structure
25 2041941-2042106 (+)ykoK2042306-2043524 (+)BH1946

Transposase (01)		BH1946Single gene

DOOR ID: 1400422		BH1946 View Structure
26 2373299-2373342 (-)PreQ12372505-2373177 (-)BH2244

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		BH2244Operon

DOOR ID: 13730		BH2241,
BH2242,
BH2243,
BH2244		 View Structure
27 2798924-2799030 (+)TPP2799129-2800413 (+)BH2678

N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase (Formylaminopyrimidine deformylase) (Amidohydrolase YlmB)		BH2678Single gene

DOOR ID: 1400705		BH2678 View Structure
28 2941510-2941604 (-)glycine2940090-2941188 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		BH2816Operon

DOOR ID: 13846		BH2814,
BH2815,
BH2816 (gcvT)		 View Structure
29 3211547-3211738 (-)lysine3210183-3211422 (-)lysC

BH3096Single gene

DOOR ID: 1400900		BH3096 (lysC) View Structure
30 3340386-3340549 (-)ykoK3339533-3340232 (-)BH3225

Magnesium (Mg2+) transporter		BH3225Operon

DOOR ID: 13924		BH3224,
BH3225		 View Structure
31 3340837-3341002 (-)ykoK3340556-3340649 (-)BH3226

BH3226 protein		BH3226Single gene

DOOR ID: 1400957		BH3226 View Structure
32 3427355-3427467 (-)SAM3426000-3427200 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		BH3300Single gene

DOOR ID: 1401001		BH3300 (metK) View Structure
33 3562757-3562930 (-)lysine3561058-3562609 (-)BH3449

Putative Na+/H+ antiporter		BH3449Single gene

DOOR ID: 1401078		BH3449 View Structure
34 3590709-3590821 (-)SAM3589474-3590491 (-)BH3481

Methionine import ATP-binding protein MetN 		BH3481Operon

DOOR ID: 13970		BH3479,
BH3480,
BH3481		 View Structure