About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
178274-178389
(-)
TPP
176241-178065 (-)
DR_A0175
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
DR_A0175
Operon
DOOR ID:
9395
DR_A0171,
DR_A0172
(thiG)
,
DR_A0173,
DR_A0174,
DR_A0175
View Structure
Genome:
Deinococcus radiodurans R1 chromosome II
(
NC_001264.1
);
Phylum:
Deinococcus-Thermus
a:2:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_001264.1";i:2;s:40:"Deinococcus radiodurans R1 chromosome II";i:3;s:19:"Deinococcus-Thermus";i:4;s:4:"1297";i:5;s:13:"178274-178389";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"176241-178065";i:10;s:1:"-";i:11;s:8:"DR_A0175";i:12;s:176:"Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)";i:13;s:8:"DR_A0175";i:14;s:6:"Operon";i:15;s:4:"9395";i:16;s:50:"DR_A0171;DR_A0172(thiG);DR_A0173;DR_A0174;DR_A0175";i:17;s:98:"thiamine biosynthetic process [GO:0009228]; thiamine diphosphate biosynthetic process [GO:0009229]";i:18;s:15:"View Structure ";}}