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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
458891-458952
(-)
glutamine
458407-458857 (-)
sll1515
Sll1515 protein
sll1515
Single gene
DOOR ID:
1381445
sll1515
View Structure
2
801280-801401
(-)
ykkC-yxkD
800033-801206 (-)
speB
Probable agmatinase 2 (1) (Agmatine ureohydrolase 2) (AUH 2)
sll1077
Operon
DOOR ID:
2294
sll1082
(nrtD)
,
sll1081,
sll1080,
sll1079
(hypB)
,
sll1078,
sll1077
(speB)
View Structure
3
1261227-1261368
(+)
cobalamin
1262048-1263260 (+)
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
slr2136
Operon
DOOR ID:
2384
slr2135
(hupE)
,
slr2136
(ispG)
View Structure
4
2999078-2999173
(+)
TPP
2999180-3000560 (+)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
slr0118
Single gene
DOOR ID:
1382118
slr0118
(thiC)
View Structure
5
3422574-3422723
(+)
ydaO-yuaA
3423031-3424381 (+)
slr0753
Uncharacterized transporter slr0753
slr0753
Single gene
DOOR ID:
1382233
slr0753
(p)
View Structure
Genome:
Synechocystis sp. PCC 6803
(
NC_000911.1
);
Phylum:
Cyanobacteria/Melainabacteria group
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