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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
380481-380569
(+)
TPP
380642-381365 (+)
HI0354
HI0354
Operon
DOOR ID:
1375
HI0354,
HI0355,
HI0357,
HI0358
View Structure
2
437548-437636
(+)
TPP
437759-438557 (+)
HI0415
HI0415
Operon
DOOR ID:
1389
HI0415,
HI0416
(thiD)
,
HI0417
(thiE)
,
HI0418
View Structure
3
827580-827757
(+)
FMN
827845-828493 (+)
ribB
HI0764
Operon
DOOR ID:
1468
HI0764
(ribB)
,
HI0765
View Structure
4
936225-936334
(-)
glycine
934742-936113 (-)
HI0883
HI0883
Single gene
DOOR ID:
1380254
HI0883
View Structure
5
1082633-1082720
(+)
TPP
1082772-1083771 (+)
tbpA
HI1019
Operon
DOOR ID:
1524
HI1019
(tbpA)
,
HI1020
(thiP)
,
HI1021
View Structure
6
1258259-1258303
(-)
PreQ1
1257569-1258257 (-)
HI1191
HI1191
Single gene
DOOR ID:
1380319
HI1191
View Structure
7
1655380-1655556
(-)
lysine
1653801-1655361 (-)
HI1586
HI1586
Single gene
DOOR ID:
1380415
HI1586
View Structure
8
1745226-1745366
(-)
MOCO
1743649-1744132 (-)
moaC
HI1675
Operon
DOOR ID:
1664
HI1673
(moaE)
,
HI1674
(moaD)
,
HI1675
(moaC)
,
HI1676
(moaA)
View Structure
Genome:
Haemophilus influenzae Rd KW20
(
NC_000907.1
);
Phylum:
Gammaproteobacteria
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