Genome: Clostridium acidurici 9a (NC_018664.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 31629-31730 (-)purine29906-31223 (-)Curi_c00280

Xanthine/uracil/vitamin C permease		Curi_c00280Operon

DOOR ID: 1158653		Curi_c00270 (guaD1),
Curi_c00280		 View Structure
2 78441-78534 (+)glycine78659-79772 (+)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Curi_c00740Operon

DOOR ID: 1158666		Curi_c00740 (gcvT),
Curi_c00750 (gcvH),
Curi_c00760 (gcvPA),
Curi_c00770 (gcvPB),
Curi_c00780 (lipB),
Curi_c00790 (lipA)		 View Structure
3 234541-234646 (+)SAM234869-236057 (+)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Curi_c02260Single gene

DOOR ID: 3926928		Curi_c02260 (metK) View Structure
4 274424-274541 (+)FMN274713-275301 (+)Curi_c02660

Riboflavin transporter		Curi_c02660Single gene

DOOR ID: 3926945		Curi_c02660 View Structure
5 608179-608275 (-)TPP606736-608044 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Curi_c05530Operon

DOOR ID: 1158752		Curi_c05520 (pyrE1),
Curi_c05530 (thiC)		 View Structure
6 810138-810221 (+)c-di-GMP-II810329-812018 (+)epsE

Type II secretion pathway protein E		Curi_c07240Single gene

DOOR ID: 3927167		Curi_c07240 (epsE) View Structure
7 831398-831579 (+)lysine831724-832561 (+)Curi_c07410

Extracellular solute-binding protein		Curi_c07410Single gene

DOOR ID: 3927179		Curi_c07410 View Structure
8 1263170-1263270 (-)TPP1262845-1263046 (-)thiS

Thiamine biosynthesis protein ThiS		Curi_c11680Operon

DOOR ID: 1158858		Curi_c11640 (thiE),
Curi_c11650 (thiF1),
Curi_c11660 (thiH),
Curi_c11670 (thiG),
Curi_c11680 (thiS)		 View Structure
9 1263447-1263550 (+)SAM1263624-1264902 (+)cysD2

O-acetylhomoserine (Thiol)-lyase CysD (9)		Curi_c11690Operon

DOOR ID: 1158859		Curi_c11690 (cysD2),
Curi_c11700 (patB)		 View Structure
10 1278968-1279123 (-)lysine1277563-1278865 (-)lysA

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		Curi_c11820Operon

DOOR ID: 1158861		Curi_c11780 (dapB),
Curi_c11790 (dapA),
Curi_c11800 (asd),
Curi_c11810 (lysC2),
Curi_c11820 (lysA)		 View Structure
11 1332113-1332226 (+)SAM1333307-1333922 (+)Curi_c12270

Putative 3-methyladenine DNA glycosylase 		Curi_c12270Operon

DOOR ID: 1158868		Curi_c12180 (aroF),
Curi_c12190 (tyrA),
Curi_c12200 (aroB),
Curi_c12210 (aroA),
Curi_c12220 (aroC),
Curi_c12230 (pheA),
Curi_c12240 (aroK),
Curi_c12250 (aroQ),
Curi_c12260 (metA),
Curi_c12270		 View Structure
12 1751367-1751469 (-)TPP1750753-1751317 (-)yuaJ

Thiamine transporter YuaJ		Curi_c16750Operon

DOOR ID: 1158932		Curi_c16740 (thiN),
Curi_c16750 (yuaJ)		 View Structure
13 1843381-1843491 (+)TPP1843629-1844124 (+)thiW

Thiamine-precursor transport protein ThiW		Curi_c17710Operon

DOOR ID: 1158946		Curi_c17710 (thiW),
Curi_c17720 (thiD),
Curi_c17730 (thiM)		 View Structure
14 1864842-1864932 (-)TPP1864054-1864714 (-)tenA

Aminopyrimidine aminohydrolase 		Curi_c17920Operon

DOOR ID: 1158951		Curi_c17890,
Curi_c17900,
Curi_c17910,
Curi_c17920 (tenA)		 View Structure
15 2041489-2041590 (-)purine2039918-2041244 (-)Curi_c19460

Xanthine/uracil/vitamin C permease		Curi_c19460Operon

DOOR ID: 1158983		Curi_c19420 (xdhA1),
Curi_c19430,
Curi_c19440,
Curi_c19450 (guaD2),
Curi_c19460		 View Structure
16 2318892-2319036 (-)glmS2317022-2318852 (-)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Curi_c21840Single gene

DOOR ID: 3927527		Curi_c21840 (glmS) View Structure
17 2600078-2600260 (-)cobalamin2599380-2599953 (-)cbiT

Precorrin-6y C5;15-methyltransferase; cbiT subunit CbiT (96)		Curi_c24750Operon

DOOR ID: 1159089		Curi_c24630 (hemL),
Curi_c24640,
Curi_c24650 (hemB),
Curi_c24660 (hemD),
Curi_c24670 (hemC),
Curi_c24680 (sirC),
Curi_c24690 (hemA),
Curi_c24700 (cbiJ),
Curi_c24710 (cbiH),
Curi_c24720 (cbiG),
Curi_c24730 (cbiF),
Curi_c24740 (cbiL),
Curi_c24750 (cbiT)		 View Structure
18 2615717-2615904 (-)cobalamin2614806-2615538 (-)cbiM

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)		Curi_c24950Operon

DOOR ID: 1159093		Curi_c24890 (cbiE),
Curi_c24900 (cbiD),
Curi_c24910 (cbiC),
Curi_c24920 (cbiX),
Curi_c24930 (cbiQ2),
Curi_c24940 (cbiN),
Curi_c24950 (cbiM)		 View Structure
19 2626786-2626903 (+)MOCO2627015-2628743 (-)Curi_c25070

Methyl-accepting chemotaxis sensory transducer		Curi_c25070Operon

DOOR ID: 1159097		Curi_c25070,
Curi_c25080,
Curi_c25090,
Curi_c25100,
Curi_c25110,
Curi_c25120,
Curi_c25130,
Curi_c25140 (cotH),
Curi_c25150,
Curi_c25160 (galE)		 View Structure
20 2721171-2721289 (+)FMN2721426-2722524 (+)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Curi_c25950Operon

DOOR ID: 1159115		Curi_c25950 (ribD),
Curi_c25960 (ribE),
Curi_c25970 (ribBA),
Curi_c25980 (ribH)		 View Structure
21 2861509-2861668 (-)ykoK2858484-2861127 (-)mgtA

Magnesium-transporting ATPase; P-type 1 		Curi_c27190Operon

DOOR ID: 1159142		Curi_c27180,
Curi_c27190 (mgtA)		 View Structure
22 2952530-2952589 (+)fluoride2952695-2954771 (+)Curi_c28040

Voltage-gated chloride channel		Curi_c28040Single gene

DOOR ID: 3927677		Curi_c28040 View Structure
23 3074157-3074278 (-)MOCO3073021-3073915 (-)Curi_c29320

Family 1 extracellular solute-binding protein		Curi_c29320Operon

DOOR ID: 1159180		Curi_c29290 (moeA4),
Curi_c29300,
Curi_c29310,
Curi_c29320		 View Structure