Genome: Pseudomonas stutzeri CCUG 29243 (NC_018028.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 115764-115851 (+)glycine116010-117270 (+)A458_00590

D-amino acid dehydrogenase small subunit
A458_00590Single gene

DOOR ID: 3852210
A458_00590 View Structure
2 348750-348833 (-)SAH347318-348725 (-)A458_01625

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
A458_01625Operon

DOOR ID: 1296592
A458_01625,
A458_01620
View Structure
3 511488-511594 (+)TPP511694-513578 (+)A458_02335

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
A458_02335Single gene

DOOR ID: 3852327
A458_02335 View Structure
4 1545329-1545545 (+)cobalamin1545662-1547516 (+)A458_07165

TonB-dependent receptor
A458_07165Operon

DOOR ID: 1296812
A458_07175,
A458_07170,
A458_07165
View Structure
5 2344772-2344871 (+)ykkC-yxkD2345041-2345857 (+)A458_10750

ABC transporter permease
A458_10750Operon

DOOR ID: 1296951
A458_10765,
A458_10760,
A458_10755,
A458_10750
View Structure
6 2348206-2348252 (+)mini-ykkC2348275-2351980 (+)A458_10770

A458_10770Single gene

DOOR ID: 3852991
A458_10770 View Structure
7 2356173-2356275 (+)ykkC-yxkD2356324-2357326 (+)A458_10785

Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
A458_10785Operon

DOOR ID: 1296952
A458_10835,
A458_10830,
A458_10825,
A458_10820,
A458_10815,
A458_10810,
A458_10805,
A458_10800,
A458_10795,
A458_10790,
A458_10785
View Structure
8 3069653-3069700 (-)mini-ykkC3069311-3069632 (-)A458_14065

A458_14065Single gene

DOOR ID: 3853230
A458_14065 View Structure
9 3498489-3498612 (+)yybP-ykoY3498702-3499290 (+)A458_16175

A458_16175Single gene

DOOR ID: 3853409
A458_16175 View Structure
10 3790339-3790555 (+)cobalamin3790652-3792512 (+)A458_17600

TonB-dependent receptor; plug
A458_17600Single gene

DOOR ID: 3853514
A458_17600 View Structure
11 3799622-3799760 (-)FMN3798838-3799501 (-)A458_17650

Riboflavin synthase subunit alpha
A458_17650Operon

DOOR ID: 1297224
A458_17650,
A458_17645,
A458_17640 (ribH),
A458_17635 (nusB),
A458_17630,
A458_17625
View Structure
12 4172888-4172953 (-)SAH4172049-4172634 (+)A458_19415

DNA-binding response regulator CorR
A458_19415Single gene

DOOR ID: 3853646
A458_19415 View Structure