Genome: Tistrella mobilis KA081020-065 (NC_017956.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 531413-531594 (-)FMN530772-531291 (-)ribH

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
TMO_0481Operon

DOOR ID: 1105907
TMO_0480,
TMO_0481 (ribH)
View Structure
2 1112603-1112680 (-)sam-alpha1111676-1112465 (-)TMO_1015

Lipoprotein; YaeC family
TMO_1015Single gene

DOOR ID: 3822572
TMO_1015 View Structure
3 1506440-1506662 (-)cobalamin1504439-1506335 (-)btuB

TonB-dependent receptor
TMO_1358Operon

DOOR ID: 1106099
TMO_1355,
TMO_1356 (cobC),
TMO_1357 (cobQ),
TMO_1358 (btuB)
View Structure
4 1703862-1703938 (-)SAH1701652-1702708 (+)TMO_1533

Extracellular solute-binding protein; family 1
TMO_1533Single gene

DOOR ID: 3822758
TMO_1533 View Structure
5 2046448-2046664 (+)cobalamin2046798-2048769 (+)btuB

TonB-dependent receptor
TMO_1857Operon

DOOR ID: 1106209
TMO_1857 (btuB),
TMO_1858,
TMO_1859 (yvrB),
TMO_1860 (fecE),
TMO_1861
View Structure
6 2545916-2546129 (-)cobalamin2545010-2545817 (-)TMO_2292

Methyltransferase type 11
TMO_2292Operon

DOOR ID: 1106303
TMO_2288 (hmuV),
TMO_2289,
TMO_2290 (yvrC),
TMO_2291 (btuB),
TMO_2292
View Structure
7 2670721-2670941 (-)cobalamin2670112-2670595 (-)TMO_2411

NrdA protein
TMO_2411Operon

DOOR ID: 1106324
TMO_2409,
TMO_2410,
TMO_2411
View Structure
8 2732570-2732678 (+)TPP2733460-2734240 (+)TMO_2472

ABC transporter permease protein
TMO_2472Operon

DOOR ID: 1106340
TMO_2471,
TMO_2472,
TMO_2473
View Structure
9 3061265-3061498 (+)cobalamin3061645-3063613 (+)btuB

Receptor
TMO_2761Operon

DOOR ID: 1106402
TMO_2761 (btuB),
TMO_2762 (fdx4),
TMO_2763,
TMO_2764 (yjbI)
View Structure
10 3094782-3094907 (-)glycine3093552-3094692 (-)gcvT

Glycine cleavage system T protein
TMO_2790Operon

DOOR ID: 1106409
TMO_2787,
TMO_2788,
TMO_2789 (gcvH),
TMO_2790 (gcvT)
View Structure
11 3094908-3095036 (-)glycine3093552-3094692 (-)gcvT

Glycine cleavage system T protein
TMO_2790Operon

DOOR ID: 1106409
TMO_2787,
TMO_2788,
TMO_2789 (gcvH),
TMO_2790 (gcvT)
View Structure
12 3254084-3254322 (-)cobalamin3253304-3253979 (-)cbiM

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)
TMO_2938Operon

DOOR ID: 1106440
TMO_2934,
TMO_2935,
TMO_2936,
TMO_2937 (cbiN),
TMO_2938 (cbiM)
View Structure
13 3501340-3501459 (-)TPP3500428-3501238 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
TMO_3178Operon

DOOR ID: 1106496
TMO_3177 (thiE),
TMO_3178 (thiM)
View Structure
14 3668867-3668946 (-)sam-alpha3667529-3668810 (-)metZ

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
TMO_3334Single gene

DOOR ID: 3823356
TMO_3334 (metZ) View Structure
15 3889878-3889954 (+)sam-alpha3890090-3891260 (+)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
TMO_3537Single gene

DOOR ID: 3823414
TMO_3537 (metK) View Structure