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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
873806-873912
(+)
preQ1-II
874504-876463 (+)
ligA
DNA ligase (Polydeoxyribonucleotide synthase [NAD(+)])
Spaf_0854
Operon
DOOR ID:
1096497
Spaf_0854
(ligA)
,
Spaf_0855,
Spaf_0856
View Structure
2
1034860-1034955
(+)
purine
1035045-1035627 (+)
Spaf_1024
Xanthine phosphoribosyltransferase (XPRTase) (2)
Spaf_1024
Operon
DOOR ID:
1096529
Spaf_1024,
Spaf_1025
View Structure
3
1565421-1565578
(-)
ykoK
1562552-1565231 (-)
mgtA
Magnesium-translocating P-type ATPase
Spaf_1547
Single gene
DOOR ID:
3798229
Spaf_1547
(mgtA)
View Structure
4
1606272-1606506
(-)
FMN
1605496-1606069 (-)
Spaf_1580
Riboflavin transporter
Spaf_1580
Operon
DOOR ID:
1096656
Spaf_1575,
Spaf_1576,
Spaf_1577,
Spaf_1578,
Spaf_1579,
Spaf_1580
View Structure
5
1829183-1829277
(-)
glycine
1827749-1829081 (-)
Spaf_1808
Putative sodium/amino acid (Alanine) symporter
Spaf_1808
Single gene
DOOR ID:
3798312
Spaf_1808
View Structure
6
2139072-2139173
(-)
TPP
2138238-2139015 (-)
Spaf_2079
ABC-type nitrate/sulfonate/bicarbonate transport system; permease component
Spaf_2079
Operon
DOOR ID:
1096760
Spaf_2076,
Spaf_2077,
Spaf_2078,
Spaf_2079
View Structure
Genome:
Streptococcus parasanguinis FW213
(
NC_017905.1
);
Phylum:
Firmicutes
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