Genome: Escherichia coli W (NC_017635.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 77186-77285 (-)TPP76171-77155 (-)tbpA

Thiamin transporter subunit
ECW_m0066Operon

DOOR ID: 1277301
ECW_m0066 (tbpA),
ECW_m0065 (thiP),
ECW_m0064 (thiQ)
View Structure
2 887178-887322 (+)MOCO888320-888833 (+)moaB

Molybdenum cofactor biosynthesis protein B
ECW_m0838Operon

DOOR ID: 1277450
ECW_m0837 (moaA),
ECW_m0838 (moaB),
ECW_m0839 (moaC),
ECW_m0840 (moaD),
ECW_m0841 (moaE)
View Structure
3 2053593-2053694 (+)yybP-ykoY2053824-2054391 (+)yebN

Probable manganese efflux pump MntP
ECW_m1992Single gene

DOOR ID: 3735784
ECW_m1992 (yebN) View Structure
4 2353928-2354024 (-)TPP2353104-2353893 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
ECW_m2305Operon

DOOR ID: 1277706
ECW_m2302 (yegW),
ECW_m2303 (yegX),
ECW_m2304 (thiD),
ECW_m2305 (thiM)
View Structure
5 3398639-3398787 (-)FMN3397881-3398535 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
ECW_m3307Single gene

DOOR ID: 3736173
ECW_m3307 (ribB) View Structure
6 4428032-4428222 (+)cobalamin4428286-4430131 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
ECW_m4324Operon

DOOR ID: 1278102
ECW_m4324 (btuB),
ECW_m4325 (murI)
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7 4459905-4460005 (-)TPP4457928-4459824 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
ECW_m4352Operon

DOOR ID: 1278107
ECW_m4347 (thiH),
ECW_m4348 (thiG),
ECW_m4349 (thiS),
ECW_m4350 (thiF),
ECW_m4351 (thiE),
ECW_m4352 (thiC)
View Structure
8 4499187-4499383 (-)lysine4497745-4499095 (-)lysC

Aspartokinase
ECW_m4386Single gene

DOOR ID: 3736517
ECW_m4386 (lysC) View Structure
9 4634596-4634642 (+)mini-ykkC4634659-4634977 (+)sugE

ECW_m4512Single gene

DOOR ID: 3736578
ECW_m4512 (sugE) View Structure
10 4725773-4725888 (+)Mg sensor4725981-4728678 (+)mgtA

Magnesium transporter
ECW_m4604Single gene

DOOR ID: 3736619
ECW_m4604 (mgtA) View Structure