Genome: Escherichia coli O83:H1 str. NRG 857C (NC_017634.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 78285-78384 (-)TPP77270-78254 (-)tbpA

Thiamine transporter substrate binding subunit
NRG857_00360Operon

DOOR ID: 1276409
NRG857_00360 (tbpA),
NRG857_00355 (thiP),
NRG857_00350 (thiQ)
View Structure
2 766246-766390 (+)MOCO767388-767901 (+)NRG857_03485

Molybdenum cofactor biosynthesis protein B
NRG857_03485Operon

DOOR ID: 1276539
NRG857_03500 (moaE),
NRG857_03495 (moaD),
NRG857_03490 (moaC),
NRG857_03485,
NRG857_03480 (moaA)
View Structure
3 1876487-1876588 (+)yybP-ykoY1876718-1877285 (+)NRG857_09105

Probable manganese efflux pump MntP
NRG857_09105Single gene

DOOR ID: 3734163
NRG857_09105 View Structure
4 2091166-2091341 (-)cobalamin2090510-2090948 (-)NRG857_10135

NRG857_10135Single gene

DOOR ID: 3734231
NRG857_10135 View Structure
5 2211068-2211164 (-)TPP2210244-2211033 (-)NRG857_10680

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
NRG857_10680Operon

DOOR ID: 1276802
NRG857_10680,
NRG857_10675
View Structure
6 3216508-3216656 (-)FMN3215750-3216404 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
NRG857_15175Single gene

DOOR ID: 3734530
NRG857_15175 (ribB) View Structure
7 4215753-4215943 (+)cobalamin4216007-4217852 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
NRG857_19835Operon

DOOR ID: 1277183
NRG857_19835 (btuB),
NRG857_19840
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8 4247255-4247355 (-)TPP4245278-4247174 (-)NRG857_19930

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
NRG857_19930Operon

DOOR ID: 1277188
NRG857_19905 (thiH),
NRG857_19910 (thiG),
NRG857_19915,
NRG857_19920,
NRG857_19925,
NRG857_19930
View Structure
9 4288864-4289060 (-)lysine4287422-4288772 (-)NRG857_20105

Aspartokinase
NRG857_20105Single gene

DOOR ID: 3734837
NRG857_20105 View Structure
10 4491925-4491971 (+)mini-ykkC4491988-4492306 (+)NRG857_21110

NRG857_21110Single gene

DOOR ID: 3734899
NRG857_21110 View Structure
11 4590884-4590999 (+)Mg sensor4591092-4593789 (+)NRG857_21580

Magnesium-transporting ATPase MgtA
NRG857_21580Single gene

DOOR ID: 3734942
NRG857_21580 View Structure