Genome: Lactobacillus johnsonii DPC 6026 (NC_017477.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 102493-102583 (-)TPP101879-102443 (-)LJP_0081c

LJP_0081cOperon

DOOR ID: 1360746
LJP_0081c,
LJP_0080c,
LJP_0079c
View Structure
2 115502-115675 (-)lysine113773-115387 (-)LJP_0094c

ABC transporter permease component
LJP_0094cOperon

DOOR ID: 1360750
LJP_0094c,
LJP_0093c
View Structure
3 238706-238878 (+)ykoK238947-239979 (+)LJP_0206

Magnesium-importing ATPase
LJP_0206Operon

DOOR ID: 1360776
LJP_0210,
LJP_0209,
LJP_0208,
LJP_0207,
LJP_0206
View Structure
4 269832-269930 (-)purine269182-269761 (-)LJP_0231c

Xanthine phosphoribosyltransferase (XPRTase) (2)
LJP_0231cOperon

DOOR ID: 1360781
LJP_0231c,
LJP_0230c
View Structure
5 552434-552504 (+)SMK_box553699-555157 (+)LJP_0496

Major facilitator superfamily permease
LJP_0496Operon

DOOR ID: 1360828
LJP_0496,
LJP_0495
View Structure
6 987544-987606 (+)fluoride987681-988968 (+)LJP_0920

Enolase (1) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase)
LJP_0920Single gene

DOOR ID: 3640105
LJP_0920 View Structure
7 1084185-1084352 (-)ykoK1081429-1084168 (-)LJP_1004c

Mg(2+) transport ATPase; P-type 2
LJP_1004cSingle gene

DOOR ID: 3640132
LJP_1004c View Structure
8 1109411-1109592 (-)lysine1108015-1109320 (-)LJP_1026c

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)
LJP_1026cOperon

DOOR ID: 1360928
LJP_1020c,
LJP_1021c,
LJP_1022c,
LJP_1023c,
LJP_1024c,
LJP_1025c,
LJP_1026c
View Structure
9 1164958-1165069 (-)FMN1164281-1164875 (-)LJP_1076c

Riboflavin transporter
LJP_1076cSingle gene

DOOR ID: 3640161
LJP_1076c View Structure
10 1351151-1351213 (-)fluoride1350246-1351062 (-)LJP_1257c

HAD superfamily hydrolase
LJP_1257cOperon

DOOR ID: 1360969
LJP_1255c,
LJP_1256c,
LJP_1257c
View Structure
11 1938294-1938391 (+)purine1938472-1939786 (+)LJP_1771

Transcriptional regulator; xre family
LJP_1771Single gene

DOOR ID: 3640381
LJP_1771 View Structure