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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
160221-160299
(-)
sam-alpha
158992-160177 (-)
SinmeB_0142
O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
SinmeB_0142
Single gene
DOOR ID:
3587865
SinmeB_0142
View Structure
2
517620-517823
(+)
cobalamin
517936-519181 (+)
SinmeB_0482
Rieske (2Fe-2S) iron-sulfur domain protein
SinmeB_0482
Operon
DOOR ID:
1029203
SinmeB_0482,
SinmeB_0483
View Structure
3
1239313-1239400
(-)
glycine
1238030-1239170 (-)
SinmeB_1181
Glycine cleavage system T protein (0)
SinmeB_1181
Operon
DOOR ID:
1029349
SinmeB_1179,
SinmeB_1180,
SinmeB_1181
View Structure
4
1664808-1665021
(-)
cobalamin
1664079-1664763 (-)
SinmeB_1591
Cob(II)yrinic acid a;c-diamide reductase
SinmeB_1591
Single gene
DOOR ID:
3588323
SinmeB_1591
View Structure
5
1836024-1836439
(-)
cobalamin
1835377-1835905 (-)
SinmeB_1772
Bifunctional adenosylcobalamin biosynthesis protein (2)
SinmeB_1772
Operon
DOOR ID:
1029462
SinmeB_1761,
SinmeB_1762,
SinmeB_1763,
SinmeB_1764,
SinmeB_1765,
SinmeB_1766,
SinmeB_1767,
SinmeB_1768,
SinmeB_1769,
SinmeB_1770,
SinmeB_1771,
SinmeB_1772
View Structure
6
2111754-2111918
(+)
FMN
2112008-2112482 (+)
SinmeB_2045
6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
SinmeB_2045
Single gene
DOOR ID:
3588442
SinmeB_2045
View Structure
7
3085819-3085896
(+)
sam-alpha
3086967-3087984 (+)
SinmeB_2951
Aldose 1-epimerase (Galactose mutarotase)
SinmeB_2951
Operon
DOOR ID:
1029723
SinmeB_2950,
SinmeB_2951
View Structure
8
3158093-3158206
(+)
TPP
3158254-3159283 (+)
SinmeB_3024
Thiamine ABC transporter; periplasmic binding protein
SinmeB_3024
Operon
DOOR ID:
1029743
SinmeB_3024,
SinmeB_3025,
SinmeB_3026
View Structure
Genome:
Sinorhizobium meliloti BL225C
(
NC_017322.1
);
Phylum:
Alphaproteobacteria
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