Genome: Xanthomonas campestris pv. raphani 756C (NC_017271.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 205388-205559 (-)yybP-ykoY204147-204372 (+)XCR_0174

XCR_0174Single gene

DOOR ID: 3559369
XCR_0174 View Structure
2 898234-898402 (+)FMN898414-899173 (+)ribE

Riboflavin synthase; alpha subunit
XCR_0859Operon

DOOR ID: 1018416
XCR_0859 (ribE),
XCR_0860,
XCR_0861 (ribH),
XCR_0862 (nusB),
XCR_0863 (thiL)
View Structure
3 966017-966131 (-)SAH964543-965986 (-)ahcY

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
XCR_0927Single gene

DOOR ID: 3559693
XCR_0927 (ahcY) View Structure
4 1362341-1362455 (-)glycine1359313-1362241 (-)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
XCR_1334Single gene

DOOR ID: 3559843
XCR_1334 (gcvP) View Structure
5 2345557-2345627 (+)fluoride2345751-2346141 (+)XCR_2256

Putative fluoride ion transporter CrcB
XCR_2256Single gene

DOOR ID: 3560190
XCR_2256 View Structure
6 3408818-3408938 (-)SAM3407714-3408737 (-)XCR_3234

Homoserine O-succinyltransferase (HST) (6) (Homoserine transsuccinylase) (HTS)
XCR_3234Operon

DOOR ID: 1018904
XCR_3232,
XCR_3233 (metB),
XCR_3234
View Structure
7 3607814-3608037 (-)cobalamin3605821-3607726 (-)btuB

TonB-dependent vitamin B12 receptor
XCR_3405Single gene

DOOR ID: 3560638
XCR_3405 (btuB) View Structure
8 3891864-3891962 (-)TPP3889871-3891749 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
XCR_3649Single gene

DOOR ID: 3560744
XCR_3649 (thiC) View Structure